myRT

myRT report for GCA_009909325.1_ASM990932v1

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Seq: CP047675.1 Klebsiella pneumoniae subsp. pneumoniae strain KUH-KPNHVF1 chromosome, complete genome (5377974 bp)
Overview 1 RT 1: 597940-603415 bp 2 RT 2: 2097720-2104287 bp 3 RT 3: 2174431-2179848 bp 4 RT 4: 3617714-3624196 bp Neighborhood of RT #1 [597940, 603429] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Neighborhood of RT #2 [2097720, 2104287] FhlA EAL YncE YncE RVT-GII PRK10597 Neighborhood of RT #3 [2174431, 2179850] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3617714, 3624198] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 597940-598170 bp Ori: QHJ19688.1 Feature: domain Description: HTH_XRE Location: 597982-598150 bp Feature: domain Description: HTH_XRE Location: 597982-5981 50 bp Feature: gene Location: 598253-598480 bp Ori: QHJ19689.1 Feature: domain Description: HTH_XRE Location: 598295-598457 bp Feature: domain Description: HTH_XRE Location: 598295-598457 bp Feature: gene Location: 598678-599955 bp Ori: QHJ19690.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 598876-599662 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 598876-599662 bp Feature: gene Location: 600443-603073 bp Ori: QHJ19691.1 Feature: domain Description: traC_PFL_4706 Location: 600482-603062 bp Feature: domain Description: traC_PFL_4706 Location: 600482-603062 bp Feature: gene Location: 603070-603429 bp Ori: QHJ19692.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603088-603415 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603088-60341 5 bp Feature: gene Location: 2097720-2099483 bp Ori: QHJ20967.1 Feature: domain Description: FhlA Location: 2097789-2098182 bp Feature: domain Description: FhlA Location: 2097789-20981 82 bp Feature: domain Description: EAL Location: 2098725-2099439 bp Feature: domain Description: EAL Location: 2098725-2099439 bp Feature: gene Location: 2099827-2101188 bp Ori: QHJ20968.1 Feature: domain Description: YncE Location: 2100235-2100643 bp Feature: domain Description: YncE Location: 21 00235-21 00643 bp Feature: domain Description: YncE Location: 2100712-2101132 bp Feature: domain Description: YncE Location: 21 0071 2-21 01 1 32 bp Feature: gene Location: 2102189-2103673 bp Ori: QHJ23914.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2102591-2103281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 02591 -21 03281 bp Feature: gene Location: 2103752-2103985 bp Ori: QHJ20969.1 Feature: domain Description: PRK10597 Location: 2103755-2103980 bp Feature: domain Description: PRK1 0597 Location: 21 03755-21 03980 bp Feature: gene Location: 2103997-2104287 bp Feature: gene Location: 2174431-2175570 bp Ori: QHJ21040.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2174614-2175514 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 7461 4-21 7551 4 bp Feature: gene Location: 2175741-2175983 bp Ori: QHJ21041.1 Feature: domain Description: DinI Location: 2175792-2175972 bp Feature: domain Description: DinI Location: 21 75792-21 75972 bp Feature: gene Location: 2176274-2177758 bp Ori: QHJ23919.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2176676-2177366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 76676-21 77366 bp Feature: gene Location: 2178163-2178582 bp Ori: QHJ21042.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2178166-2178577 bp Feature: domain Description: PRK1 0276 Location: 21 781 66-21 78577 bp Feature: gene Location: 2178585-2179850 bp Ori: QHJ21043.1 Gene: umuC Feature: domain Description: umuC Location: 2178588-2179848 bp Feature: domain Description: umuC Location: 21 78588-21 79848 bp Feature: gene Location: 3617714-3618772 bp Ori: QHJ22265.1 Feature: domain Description: YccC Location: 3617720-3618758 bp Feature: domain Description: YccC Location: 361 7720-361 8758 bp Feature: gene Location: 3618871-3619344 bp Ori: QHJ22266.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 3618874-3619333 bp Feature: domain Description: PRK1 001 6 Location: 361 8874-361 9333 bp Feature: gene Location: 3619426-3620910 bp Ori: QHJ23999.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3619828-3620518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 9828-362051 8 bp Feature: gene Location: 3621430-3622599 bp Ori: QHJ22267.1 Gene: dacD Feature: domain Description: dacD Location: 3621439-3622594 bp Feature: domain Description: dacD Location: 3621 439-3622594 bp Feature: gene Location: 3622774-3624198 bp Ori: QHJ22268.1 Gene: sbcB Feature: domain Description: SbcB Location: 3622780-3624196 bp Feature: domain Description: SbcB Location: 3622780-36241 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751, FhlA (COG3604), EAL (smart00052), YncE (COG3391), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), GT9_LPS_heptosyltransferase (cd03789)
DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)