myRT

myRT report for GCA_009909385.1_ASM990938v1

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Seq: CP047688.1 Serratia marcescens strain 1140- chromosome, complete genome (5429004 bp)
Overview 1 RT 1: 67359-71666 bp 2 RT 2: 78065-83588 bp Neighborhood of RT #1 [67359, 71728] PRK09692 RVT-Retrons PRK09678 Neighborhood of RT #2 [78065, 83608] YafY RVT-Retrons PRK10819 HTH_1 PBP2_DntR_like_1 Feature: gene Location: 67359-68525 bp Ori: QHJ34426.1 Feature: domain Description: PRK09692 Location: 67368-68517 bp Feature: domain Description: PRK09692 Location: 67368-6851 7 bp Feature: gene Location: 68562-69044 bp Feature: gene Location: 69041-69967 bp Ori: QHJ34428.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69146-69728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 691 46-69728 bp Feature: gene Location: 69954-70934 bp Feature: gene Location: 71474-71728 bp Ori: QHJ34430.1 Feature: domain Description: PRK09678 Location: 71477-71666 bp Feature: domain Description: PRK09678 Location: 71 477-71 666 bp Feature: gene Location: 78065-78826 bp Ori: QHJ34438.1 Feature: domain Description: YafY Location: 78305-78641 bp Feature: domain Description: YafY Location: 78305-78641 bp Feature: gene Location: 79935-80888 bp Feature: gene Location: 80875-81825 bp Ori: QHJ34440.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80974-81565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80974-81 565 bp Feature: gene Location: 82119-82478 bp Ori: QHJ34441.1 Feature: domain Description: PRK10819 Location: 82188-82431 bp Feature: domain Description: PRK1 081 9 Location: 821 88-82431 bp Feature: gene Location: 82706-83608 bp Ori: QHJ34442.1 Feature: domain Description: HTH_1 Location: 82730-82901 bp Feature: domain Description: HTH_1 Location: 82730-82901 bp Feature: domain Description: PBP2_DntR_like_1 Location: 82997-83588 bp Feature: domain Description: PBP2_DntR_like_1 Location: 82997-83588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), YafY (COG2378), PRK10819 (transport protein TonB; Provisional), HTH_1 (pfam00126), PBP2_DntR_like_1 (cd08460)