myRT

myRT report for GCA_009913675.1_ASM991367v1

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Seq: CP028275.1 Lactobacillus plantarum strain SRCM100995 chromosome, complete genome (3192505 bp)
Overview 1 RT 1: 2261271-2266882 bp 2 RT 2: 2535842-2541922 bp Neighborhood of RT #1 [2261271, 2266890] RVT-GII GIIM fumC PRK06481 Neighborhood of RT #2 [2535842, 2541957] Big_8 COG4932 COG4932 RVT-GII RVT-GII GIIM P-type_ATPase_H Feature: gene Location: 2261271-2261507 bp Feature: gene Location: 2262086-2262238 bp Feature: gene Location: 2262477-2263472 bp Ori: QHM31523.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262480-2263026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262480-2263026 bp Feature: domain Description: GIIM Note: maturase Location: 2263080-2263299 bp Feature: domain Description: GIIM Note: maturase Location: 2263080-2263299 bp Feature: gene Location: 2263947-2265329 bp Ori: QHM31524.1 Gene: fumC Feature: domain Description: fumC Location: 2263950-2265318 bp Feature: domain Description: fumC Location: 2263950-226531 8 bp Feature: gene Location: 2265502-2266890 bp Ori: QHM31525.1 Gene: ifcA_3 Feature: domain Description: PRK06481 Location: 2265541-2266882 bp Feature: domain Description: PRK06481 Location: 2265541 -2266882 bp Feature: gene Location: 2535842-2536309 bp Ori: QHM31745.1 Feature: domain Description: Big_8 Location: 2536016-2536229 bp Feature: domain Description: Big_8 Location: 253601 6-2536229 bp Feature: gene Location: 2536284-2537258 bp Ori: QHM31746.1 Feature: domain Description: COG4932 Location: 2536332-2536635 bp Feature: domain Description: COG4932 Location: 2536332-2536635 bp Feature: domain Description: COG4932 Location: 2536692-2537253 bp Feature: domain Description: COG4932 Location: 2536692-2537253 bp Feature: gene Location: 2538274-2538579 bp Ori: QHM31747.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538382-2538571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538382-2538571 bp Feature: gene Location: 2538530-2538901 bp Ori: QHM31748.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538566-2538890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538566-2538890 bp Feature: gene Location: 2539079-2539471 bp Ori: QHM31749.1 Feature: domain Description: GIIM Note: maturase Location: 2539085-2539241 bp Feature: domain Description: GIIM Note: maturase Location: 2539085-2539241 bp Feature: gene Location: 2539684-2541957 bp Ori: QHM31750.1 Feature: domain Description: P-type_ATPase_H Location: 2539714-2541922 bp Feature: domain Description: P-type_ATPase_H Location: 253971 4-2541 922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fumC (PRK00485), PRK06481 (flavocytochrome c), Big_8 (pfam17961), COG4932 (Uncharacterized surface anchored protein ), P-type_ATPase_H (cd02076)