myRT

myRT report for GCA_009913695.1_ASM991369v1

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Seq: CP028222.1 Lactobacillus plantarum strain SRCM101105 chromosome, complete genome (3198315 bp)
Overview 1 RT 1: 34202-40282 bp 2 RT 2: 2959418-2965029 bp Neighborhood of RT #1 [34202, 40317] Big_8 COG4932 COG4932 RVT-GII RVT-GII GIIM P-type_ATPase_H Neighborhood of RT #2 [2959418, 2965037] RVT-GII GIIM fumC PRK06481 Feature: gene Location: 34202-34669 bp Ori: QHM32694.1 Feature: domain Description: Big_8 Location: 34376-34589 bp Feature: domain Description: Big_8 Location: 34376-34589 bp Feature: gene Location: 34644-35618 bp Ori: QHM32695.1 Feature: domain Description: COG4932 Location: 34692-34995 bp Feature: domain Description: COG4932 Location: 34692-34995 bp Feature: domain Description: COG4932 Location: 35052-35613 bp Feature: domain Description: COG4932 Location: 35052-3561 3 bp Feature: gene Location: 36634-36939 bp Ori: QHM32696.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36742-36931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36742-36931 bp Feature: gene Location: 36890-37261 bp Ori: QHM32697.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36926-37250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36926-37250 bp Feature: gene Location: 37439-37831 bp Ori: QHM32698.1 Feature: domain Description: GIIM Note: maturase Location: 37445-37601 bp Feature: domain Description: GIIM Note: maturase Location: 37445-37601 bp Feature: gene Location: 38044-40317 bp Ori: QHM32699.1 Feature: domain Description: P-type_ATPase_H Location: 38074-40282 bp Feature: domain Description: P-type_ATPase_H Location: 38074-40282 bp Feature: gene Location: 2959418-2959654 bp Feature: gene Location: 2960233-2960385 bp Feature: gene Location: 2960624-2961619 bp Ori: QHM35419.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2960627-2961173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2960627-2961 1 73 bp Feature: domain Description: GIIM Note: maturase Location: 2961227-2961446 bp Feature: domain Description: GIIM Note: maturase Location: 2961 227-2961 446 bp Feature: gene Location: 2962094-2963476 bp Ori: QHM35420.1 Gene: fumC Feature: domain Description: fumC Location: 2962097-2963465 bp Feature: domain Description: fumC Location: 2962097-2963465 bp Feature: gene Location: 2963649-2965037 bp Ori: QHM35421.1 Gene: ifcA_3 Feature: domain Description: PRK06481 Location: 2963688-2965029 bp Feature: domain Description: PRK06481 Location: 2963688-2965029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_8 (pfam17961), COG4932 (Uncharacterized surface anchored protein ), RVT-GII, GIIM (pfam08388), P-type_ATPase_H (cd02076), fumC (PRK00485), PRK06481 (flavocytochrome c)