myRT

myRT report for GCA_009913975.1_ASM991397v1

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Seq: CP028261.1 Lactobacillus plantarum strain SRCM102737 chromosome, complete genome (3249738 bp)
Overview 1 RT 1: 436813-443828 bp 2 RT 2: 731129-737209 bp Neighborhood of RT #1 [436813, 443836] COG3666 DDE_Tnp_1 RVT-GII GIIM fumC PRK06481 Neighborhood of RT #2 [731129, 737244] Big_8 COG4932 COG4932 RVT-GII RVT-GII GIIM P-type_ATPase_H Feature: gene Location: 436813-438462 bp Ori: QHM61542.1 Feature: domain Description: COG3666 Location: 436831-437272 bp Feature: domain Description: COG3666 Location: 436831 -437272 bp Feature: domain Description: DDE_Tnp_1 Location: 437584-438337 bp Feature: domain Description: DDE_Tnp_1 Location: 437584-438337 bp Feature: gene Location: 439032-439184 bp Feature: gene Location: 439423-440418 bp Ori: QHM61544.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439426-439972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439426-439972 bp Feature: domain Description: GIIM Note: maturase Location: 440026-440245 bp Feature: domain Description: GIIM Note: maturase Location: 440026-440245 bp Feature: gene Location: 440893-442275 bp Ori: QHM61545.1 Gene: fumC Feature: domain Description: fumC Location: 440896-442264 bp Feature: domain Description: fumC Location: 440896-442264 bp Feature: gene Location: 442448-443836 bp Ori: QHM61546.1 Gene: ifcA_2 Feature: domain Description: PRK06481 Location: 442487-443828 bp Feature: domain Description: PRK06481 Location: 442487-443828 bp Feature: gene Location: 731129-731596 bp Ori: QHM61810.1 Feature: domain Description: Big_8 Location: 731303-731516 bp Feature: domain Description: Big_8 Location: 731 303-731 51 6 bp Feature: gene Location: 731571-732545 bp Ori: QHM61811.1 Feature: domain Description: COG4932 Location: 731619-731922 bp Feature: domain Description: COG4932 Location: 731 61 9-731 922 bp Feature: domain Description: COG4932 Location: 731979-732540 bp Feature: domain Description: COG4932 Location: 731 979-732540 bp Feature: gene Location: 733561-733866 bp Ori: QHM61812.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733669-733858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733669-733858 bp Feature: gene Location: 733817-734188 bp Ori: QHM61813.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733853-734177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733853-7341 77 bp Feature: gene Location: 734366-734758 bp Ori: QHM61814.1 Feature: domain Description: GIIM Note: maturase Location: 734372-734528 bp Feature: domain Description: GIIM Note: maturase Location: 734372-734528 bp Feature: gene Location: 734971-737244 bp Ori: QHM61815.1 Feature: domain Description: P-type_ATPase_H Location: 735001-737209 bp Feature: domain Description: P-type_ATPase_H Location: 735001 -737209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), fumC (PRK00485), PRK06481 (flavocytochrome c), Big_8 (pfam17961), COG4932 (Uncharacterized surface anchored protein ), P-type_ATPase_H (cd02076)