myRT

myRT report for GCA_009930915.1_ASM993091v1

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Seq: CP026084.1 Streptococcus agalactiae strain NJ1606 chromosome, complete genome (2136438 bp)
Overview 1 RT 1: 1351008-1360442 bp 2 RT 2: 1374440-1379824 bp Neighborhood of RT #1 [1351008, 1360594] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #2 [1374440, 1379824] TraG-D_C RVT-GII T4SS-DNA_transf Feature: gene Location: 1351008-1351307 bp Feature: gene Location: 1351378-1352766 bp Feature: domain Description: KOG1000 Location: 1351702-1352017 bp Feature: domain Description: KOG1 000 Location: 1 351 702-1 35201 7 bp Feature: gene Location: 1352859-1354637 bp Ori: QHO95777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1353120-1353912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3531 20-1 35391 2 bp Feature: domain Description: Intron_maturas2 Location: 1354017-1354248 bp Feature: domain Description: Intron_maturas2 Location: 1 35401 7-1 354248 bp Feature: domain Description: HNHc Note: nucleases Location: 1354413-1354599 bp Feature: domain Description: HNHc Note: nucleases Location: 1 35441 3-1 354599 bp Feature: gene Location: 1355036-1355161 bp Feature: gene Location: 1355135-1360594 bp Ori: QHO95778.1 Feature: domain Description: N6_Mtase Location: 1357145-1357736 bp Feature: domain Description: N6_Mtase Location: 1 3571 45-1 357736 bp Feature: domain Description: COG4646 Location: 1358327-1360442 bp Feature: domain Description: COG4646 Location: 1 358327-1 360442 bp Feature: gene Location: 1374440-1374682 bp Feature: gene Location: 1374700-1375317 bp Ori: QHO95788.1 Feature: domain Description: TraG-D_C Location: 1374778-1375105 bp Feature: domain Description: TraG-D_C Location: 1 374778-1 3751 05 bp Feature: gene Location: 1375346-1377253 bp Ori: QHO95789.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375655-1376411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 375655-1 37641 1 bp Feature: gene Location: 1378062-1379336 bp Feature: domain Description: T4SS-DNA_transf Location: 1378416-1379337 bp Feature: domain Description: T4SS-DNA_transf Location: 1 37841 6-1 379337 bp Feature: gene Location: 1379336-1379824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), TraG-D_C (pfam12696), T4SS-DNA_transf (pfam02534)