myRT

myRT report for GCA_009931475.1_ASM993147v1

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Seq: CP045522.1 Shigella flexneri strain 5908.2 chromosome, complete genome (4549591 bp)
Overview 1 RT 1: 1732932-1736399 bp Neighborhood of RT #1 [1732932, 1736796] Inovirus_Gp2 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 1732932-1733270 bp Feature: domain Description: Inovirus_Gp2 Location: 1733001-1733265 bp Feature: domain Description: Inovirus_Gp2 Location: 1 733001 -1 733265 bp Feature: gene Location: 1733313-1733786 bp Feature: domain Description: PHA02517 Location: 1733319-1733784 bp Feature: domain Description: PHA0251 7 Location: 1 73331 9-1 733784 bp Feature: gene Location: 1733876-1735384 bp Ori: QHQ05886.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734134-1734866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7341 34-1 734866 bp Feature: domain Description: GIIM Note: maturase Location: 1734941-1735139 bp Feature: domain Description: GIIM Note: maturase Location: 1 734941 -1 7351 39 bp Feature: gene Location: 1735693-1736064 bp Feature: gene Location: 1736057-1736796 bp Feature: domain Description: InsE Location: 1736060-1736399 bp Feature: domain Description: InsE Location: 1 736060-1 736399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inovirus_Gp2 (pfam11726), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CP045523.1 Shigella flexneri strain 5908.2 plasmid p5908-2 (137368 bp)
Overview 1 RT 1: 48999-53433 bp Neighborhood of RT #1 [48999, 53438] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 48999-49190 bp Feature: gene Location: 49756-49962 bp Feature: gene Location: 50611-52512 bp Ori: QHQ06042.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50878-51709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50878-51709 bp Feature: domain Description: Intron_maturas2 Location: 51823-52081 bp Feature: domain Description: Intron_maturas2 Location: 5182 3-52 081 bp Feature: domain Description: HNHc Note: nucleases Location: 52255-52417 bp Feature: domain Description: HNHc Note: nucleases Location: 52 2 55-52 417 bp Feature: gene Location: 52662-53147 bp Ori: QHQ06043.1 Gene: ssb Feature: domain Description: PRK13732 Location: 52665-53145 bp Feature: domain Description: PRK13732 Location: 52 665-53145 bp Feature: gene Location: 53205-53438 bp Ori: QHQ06044.1 Feature: domain Description: DUF905 Location: 53235-53433 bp Feature: domain Description: DUF905 Location: 532 35-53433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)