myRT

myRT report for GCA_009931515.2_ASM993151v2

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Seq: CP045527.2 Shigella sonnei strain 6607.69 plasmid p6607-69, complete sequence (89848 bp)
Overview 1 RT 1: 38576-42996 bp Neighborhood of RT #1 [38576, 43118] DUF905 PRK13732 RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 38576-38809 bp Ori: QHQ14349.1 Feature: domain Description: DUF905 Location: 38606-38804 bp Feature: domain Description: DUF905 Location: 38606-38804 bp Feature: gene Location: 38867-39394 bp Ori: QHQ14350.1 Feature: domain Description: PRK13732 Location: 38870-39392 bp Feature: domain Description: PRK1 3732 Location: 38870-39392 bp Feature: gene Location: 40562-42229 bp Ori: QHQ14351.1 Gene: ltrA Feature: domain Description: RVT_N Location: 40610-40847 bp Feature: domain Description: RVT_N Location: 4061 0-40847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40898-41540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40898-41 540 bp Feature: domain Description: GIIM Note: maturase Location: 41591-41825 bp Feature: domain Description: GIIM Note: maturase Location: 41 591 -41 825 bp Feature: domain Description: HNHc Note: nucleases Location: 42035-42194 bp Feature: domain Description: HNHc Note: nucleases Location: 42035-421 94 bp Feature: gene Location: 42508-42699 bp Feature: gene Location: 42696-43118 bp Ori: QHQ14353.1 Feature: domain Description: DUF1380 Location: 42699-42996 bp Feature: domain Description: DUF1 380 Location: 42699-42996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)