myRT

myRT report for GCA_009931535.1_ASM993153v1

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Seq: CP046376.1 Pectobacterium parmentieri strain HC chromosome, complete genome (5208618 bp)
Overview 1 RT 1: 2165713-2175331 bp 2 RT 2: 2493961-2501632 bp Neighborhood of RT #1 [2165713, 2175331] TIGR02646 COG3950 RVT-Retrons ArdC Neighborhood of RT #2 [2493961, 2501632] RVT-Retrons HTH_XRE Feature: gene Location: 2165713-2166444 bp Ori: QHQ16166.1 Feature: domain Description: TIGR02646 Location: 2165812-2166322 bp Feature: domain Description: TIGR02646 Location: 21 6581 2-21 66322 bp Feature: gene Location: 2166444-2168069 bp Ori: QHQ16167.1 Feature: domain Description: COG3950 Location: 2166618-2167971 bp Feature: domain Description: COG3950 Location: 21 6661 8-21 67971 bp Feature: gene Location: 2168074-2169006 bp Ori: QHQ16168.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2168173-2168770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 681 73-21 68770 bp Feature: gene Location: 2169821-2170765 bp Ori: QHQ16169.1 Feature: domain Description: ArdC Location: 2169914-2170757 bp Feature: domain Description: ArdC Location: 21 6991 4-21 70757 bp Feature: gene Location: 2171297-2175331 bp Feature: gene Location: 2493961-2495553 bp Feature: gene Location: 2496168-2500010 bp Feature: gene Location: 2500109-2501071 bp Ori: QHQ16463.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2500262-2500817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2500262-250081 7 bp Feature: gene Location: 2501052-2501342 bp Ori: QHQ16464.1 Feature: domain Description: HTH_XRE Location: 2501064-2501229 bp Feature: domain Description: HTH_XRE Location: 2501 064-2501 229 bp Feature: gene Location: 2501393-2501632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, ArdC (COG4227), HTH_XRE (smart00530)