myRT

myRT report for GCA_009936215.1_ASM993621v1

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Seq: AP019551.1 Athalassotoga saccharophila NAS-01 DNA, complete genome (1957762 bp)
Overview 1 RT 1: 1413928-1422623 bp Neighborhood of RT #1 [1413928, 1423546] Sigma70_r4 IS285 RVT-GII met_A_Alw26 Eco57I PLDc_N_Snf2_like SSL2 DEXDc_RapA SF2_C_SNF Feature: gene Location: 1413928-1414128 bp Ori: BBJ28536.1 Feature: domain Description: Sigma70_r4 Location: 1413973-1414096 bp Feature: domain Description: Sigma70_r4 Location: 1 41 3973-1 41 4096 bp Feature: gene Location: 1414298-1415524 bp Ori: BBJ28537.1 Feature: domain Description: IS285 Location: 1414349-1415516 bp Feature: domain Description: IS285 Location: 1 41 4349-1 41 551 6 bp Feature: gene Location: 1415579-1416010 bp Ori: BBJ28538.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1415834-1415948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 5834-1 41 5948 bp Feature: gene Location: 1416537-1420241 bp Ori: BBJ28539.1 Feature: domain Description: met_A_Alw26 Location: 1417839-1417965 bp Feature: domain Description: met_A_Alw26 Location: 1 41 7839-1 41 7965 bp Feature: domain Description: Eco57I Location: 1418652-1419048 bp Feature: domain Description: Eco57I Location: 1 41 8652-1 41 9048 bp Feature: gene Location: 1420238-1423546 bp Ori: BBJ28540.1 Feature: domain Description: PLDc_N_Snf2_like Location: 1420346-1420916 bp Feature: domain Description: PLDc_N_Snf2_like Location: 1 420346-1 42091 6 bp Feature: domain Description: SSL2 Location: 1421063-1421237 bp Feature: domain Description: SSL2 Location: 1 421 063-1 421 237 bp Feature: domain Description: DEXDc_RapA Location: 1421333-1421558 bp Feature: domain Description: DEXDc_RapA Location: 1 421 333-1 421 558 bp Feature: domain Description: SF2_C_SNF Location: 1422176-1422623 bp Feature: domain Description: SF2_C_SNF Location: 1 4221 76-1 422623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4 (pfam04545), IS285 (COG3328), RVT-GII, met_A_Alw26 (TIGR02987), Eco57I (pfam07669), PLDc_N_Snf2_like (cd09178), SSL2 (COG1061), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)