myRT

myRT report for GCA_009936235.1_ASM993623v1

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Seq: AP022314.1 Mycobacterium xenopi JCM 15661T DNA, complete genome (4917655 bp)
Overview 1 RT 1: 468333-475567 bp 2 RT 2: 576414-581136 bp 3 RT 3: 818708-824938 bp 4 RT 4: 1450945-1454273 bp 5 RT 5: 2178696-2186284 bp 6 RT 6: 4121040-4125478 bp 7 RT 7: 4866725-4869648 bp Neighborhood of RT #1 [468333, 475572] PRK00174 RVT-GII GIIM PBP2_NikA_DppA_OppA_like DppB Neighborhood of RT #2 [576414, 581246] AcrR PRK07801 RVT-GII GIIM rve Neighborhood of RT #3 [818708, 824938] YktD ArgArg_F420 RVT-GII GIIM Neighborhood of RT #4 [1450945, 1454293] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #5 [2178696, 2186358] CYTH-like_Pase CHAD panB RVT-GII GIIM acyl_WS_DGAT Abhydrolase_1 Neighborhood of RT #6 [4121040, 4125486] HNH_4 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #7 [4866725, 4869648] RVT-GII GIIM Feature: gene Location: 468333-469028 bp Feature: gene Location: 469037-470995 bp Ori: BBU20623.1 Feature: domain Description: PRK00174 Location: 469076-470990 bp Feature: domain Description: PRK001 74 Location: 469076-470990 bp Feature: gene Location: 471430-472935 bp Ori: BBU20624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471913-472537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 91 3-472537 bp Feature: domain Description: GIIM Note: maturase Location: 472630-472843 bp Feature: domain Description: GIIM Note: maturase Location: 472630-472843 bp Feature: gene Location: 473064-474644 bp Ori: BBU20625.1 Gene: dppA Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 473139-474594 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 4731 39-474594 bp Feature: gene Location: 474646-475572 bp Ori: BBU20626.1 Gene: dppB Feature: domain Description: DppB Location: 474649-475567 bp Feature: domain Description: DppB Location: 474649-475567 bp Feature: gene Location: 576414-576998 bp Ori: BBU20729.1 Feature: domain Description: AcrR Location: 576423-576849 bp Feature: domain Description: AcrR Location: 576423-576849 bp Feature: gene Location: 577000-578160 bp Ori: BBU20730.1 Feature: domain Description: PRK07801 Location: 577003-578158 bp Feature: domain Description: PRK07801 Location: 577003-5781 58 bp Feature: gene Location: 578877-580322 bp Ori: BBU20731.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579300-579924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579300-579924 bp Feature: domain Description: GIIM Note: maturase Location: 580017-580230 bp Feature: domain Description: GIIM Note: maturase Location: 58001 7-580230 bp Feature: gene Location: 580329-580703 bp Feature: gene Location: 580872-581246 bp Ori: BBU20733.1 Feature: domain Description: rve Location: 580905-581136 bp Feature: domain Description: rve Location: 580905-581 1 36 bp Feature: gene Location: 818708-819607 bp Ori: BBU20973.1 Feature: domain Description: YktD Location: 818717-819590 bp Feature: domain Description: YktD Location: 81 871 7-81 9590 bp Feature: gene Location: 819612-820721 bp Ori: BBU20974.1 Gene: fgd2 Feature: domain Description: ArgArg_F420 Location: 819618-820719 bp Feature: domain Description: ArgArg_F420 Location: 81 961 8-82071 9 bp Feature: gene Location: 822288-823793 bp Ori: BBU20975.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822771-823395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822771 -823395 bp Feature: domain Description: GIIM Note: maturase Location: 823488-823701 bp Feature: domain Description: GIIM Note: maturase Location: 823488-823701 bp Feature: gene Location: 823995-824270 bp Feature: gene Location: 824672-824938 bp Feature: gene Location: 1450945-1451244 bp Ori: BBU21641.1 Feature: domain Description: InsE Location: 1450948-1451230 bp Feature: domain Description: InsE Location: 1 450948-1 451 230 bp Feature: gene Location: 1451256-1451750 bp Ori: BBU21642.1 Feature: domain Description: PHA02517 Location: 1451310-1451658 bp Feature: domain Description: PHA0251 7 Location: 1 451 31 0-1 451 658 bp Feature: gene Location: 1452262-1453365 bp Ori: BBU21643.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1452580-1453249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 452580-1 453249 bp Feature: gene Location: 1453335-1453709 bp Ori: BBU21644.1 Feature: domain Description: GIIM Note: maturase Location: 1453341-1453536 bp Feature: domain Description: GIIM Note: maturase Location: 1 453341 -1 453536 bp Feature: gene Location: 1453667-1454293 bp Ori: BBU21645.1 Feature: domain Description: PHA02517 Location: 1453817-1454273 bp Feature: domain Description: PHA0251 7 Location: 1 45381 7-1 454273 bp Feature: gene Location: 2178696-2180192 bp Ori: BBU22314.1 Feature: domain Description: CYTH-like_Pase Location: 2178735-2179269 bp Feature: domain Description: CYTH-like_Pase Location: 21 78735-21 79269 bp Feature: domain Description: CHAD Location: 2179383-2180124 bp Feature: domain Description: CHAD Location: 21 79383-21 801 24 bp Feature: gene Location: 2180331-2181176 bp Ori: BBU22315.1 Gene: panB Feature: domain Description: panB Location: 2180394-2181174 bp Feature: domain Description: panB Location: 21 80394-21 81 1 74 bp Feature: gene Location: 2181735-2183240 bp Ori: BBU22316.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2182218-2182842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 8221 8-21 82842 bp Feature: domain Description: GIIM Note: maturase Location: 2182935-2183148 bp Feature: domain Description: GIIM Note: maturase Location: 21 82935-21 831 48 bp Feature: gene Location: 2183351-2184742 bp Ori: BBU22317.1 Feature: domain Description: acyl_WS_DGAT Location: 2183363-2184731 bp Feature: domain Description: acyl_WS_DGAT Location: 21 83363-21 84731 bp Feature: gene Location: 2184784-2186358 bp Ori: BBU22318.1 Feature: domain Description: Abhydrolase_1 Location: 2185102-2186284 bp Feature: domain Description: Abhydrolase_1 Location: 21 851 02-21 86284 bp Feature: gene Location: 4121040-4122254 bp Ori: BBU24291.1 Feature: domain Description: HNH_4 Location: 4121772-4121910 bp Feature: domain Description: HNH_4 Location: 41 21 772-41 21 91 0 bp Feature: gene Location: 4122233-4122589 bp Ori: BBU24292.1 Feature: domain Description: PHA02517 Location: 4122239-4122569 bp Feature: domain Description: PHA0251 7 Location: 41 22239-41 22569 bp Feature: gene Location: 4122725-4124173 bp Ori: BBU24293.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4123043-4123730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 23043-41 23730 bp Feature: domain Description: GIIM Note: maturase Location: 4123805-4124000 bp Feature: domain Description: GIIM Note: maturase Location: 41 23805-41 24000 bp Feature: gene Location: 4124683-4125177 bp Ori: BBU24294.1 Feature: domain Description: PHA02517 Location: 4124737-4125085 bp Feature: domain Description: PHA0251 7 Location: 41 24737-41 25085 bp Feature: gene Location: 4125229-4125486 bp Ori: BBU24295.1 Feature: domain Description: InsE Location: 4125232-4125478 bp Feature: domain Description: InsE Location: 41 25232-41 25478 bp Feature: gene Location: 4866725-4867177 bp Feature: gene Location: 4867174-4867428 bp Feature: gene Location: 4867539-4868912 bp Ori: BBU25063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867890-4868514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867890-486851 4 bp Feature: domain Description: GIIM Note: maturase Location: 4868607-4868820 bp Feature: domain Description: GIIM Note: maturase Location: 4868607-4868820 bp Feature: gene Location: 4868909-4869043 bp Feature: gene Location: 4869037-4869648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00174 (acetyl-CoA synthetase; Provisional), RVT-GII, GIIM (pfam08388), PBP2_NikA_DppA_OppA_like (cl01709), DppB (COG0601), AcrR (COG1309), PRK07801 (acetyl-CoA C-acetyltransferase), rve (pfam00665), YktD (COG3315), ArgArg_F420 (TIGR04465)
InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), CYTH-like_Pase (cl11964), CHAD (smart00880), panB (TIGR00222), acyl_WS_DGAT (TIGR02946), Abhydrolase_1 (pfam00561), HNH_4 (pfam13395)