myRT

myRT report for GCA_009938115.1_ASM993811v1

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Seq: CP042299.1 Vibrio cholerae O1 strain AAS91 chromosome 1, complete sequence (2961008 bp)
Overview 1 RT 1: 2046571-2051710 bp Neighborhood of RT #1 [2046571, 2051832] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 2046571-2047431 bp Ori: QHQ90775.1 Feature: domain Description: LysR Location: 2046577-2047405 bp Feature: domain Description: LysR Location: 2046577-2047405 bp Feature: gene Location: 2047361-2048146 bp Ori: QHQ90776.1 Feature: domain Description: PRK10621 Location: 2047370-2048141 bp Feature: domain Description: PRK1 0621 Location: 2047370-20481 41 bp Feature: gene Location: 2048608-2049579 bp Ori: QHQ90777.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2048746-2049343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2048746-2049343 bp Feature: gene Location: 2049580-2051202 bp Ori: QHQ90778.1 Feature: domain Description: COG3950 Location: 2049766-2051197 bp Feature: domain Description: COG3950 Location: 2049766-2051 1 97 bp Feature: gene Location: 2051215-2051832 bp Ori: QHQ90779.1 Feature: domain Description: TIGR02646 Location: 2051326-2051710 bp Feature: domain Description: TIGR02646 Location: 2051 326-2051 71 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: CP042300.1 Vibrio cholerae O1 strain AAS91 chromosome 2, complete sequence (1124701 bp)
Overview 1 RT 1: 387725-394668 bp Neighborhood of RT #1 [387725, 394688] PRK06939 tdh RVT-Retrons AAA_15 AAA_15 Hypoth_Ymh Feature: gene Location: 387725-388918 bp Ori: QHQ91932.1 Feature: domain Description: PRK06939 Location: 387728-388916 bp Feature: domain Description: PRK06939 Location: 38772 8-388916 bp Feature: gene Location: 388921-389952 bp Ori: QHQ91933.1 Feature: domain Description: tdh Location: 388930-389950 bp Feature: domain Description: tdh Location: 388930-389950 bp Feature: gene Location: 390347-391447 bp Ori: QHQ91934.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390488-391046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390488-391046 bp Feature: gene Location: 391623-393740 bp Ori: QHQ91935.1 Feature: domain Description: AAA_15 Location: 391626-392043 bp Feature: domain Description: AAA_15 Location: 39162 6-392 043 bp Feature: domain Description: AAA_15 Location: 392178-392607 bp Feature: domain Description: AAA_15 Location: 392 178-392 607 bp Feature: gene Location: 393888-394688 bp Ori: QHQ91936.1 Feature: domain Description: Hypoth_Ymh Location: 394308-394668 bp Feature: domain Description: Hypoth_Ymh Location: 394308-394668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional), tdh (TIGR00692), RVT-Retrons, AAA_15 (pfam13175), Hypoth_Ymh (pfam09509)