myRT

myRT report for GCA_009938285.1_ASM993828v1

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Seq: AP022341.1 Enterococcus faecium KUHS13 DNA, complete genome (2802719 bp)
Overview 1 RT 1: 278355-282584 bp 2 RT 2: 2637882-2649445 bp 3 RT 3: 2655877-2663197 bp Neighborhood of RT #1 [278355, 282584] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc Neighborhood of RT #2 [2637882, 2649972] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA NT_2-5OAS_ClassI-CCAase Neighborhood of RT #3 [2655877, 2663197] Lysozyme_like Spr RVT-GII RVT-GII HNHc TpcC Feature: gene Location: 278355-279560 bp Ori: BBU64664.1 Feature: domain Description: HTH_XRE Location: 278400-278544 bp Feature: domain Description: HTH_XRE Location: 278400-278544 bp Feature: domain Description: Rol_Rep_N Location: 278571-278838 bp Feature: domain Description: Rol_Rep_N Location: 278571 -278838 bp Feature: domain Description: Rep_trans Location: 278862-279471 bp Feature: domain Description: Rep_trans Location: 278862-279471 bp Feature: gene Location: 280344-280655 bp Feature: gene Location: 280720-281571 bp Ori: BBU64666.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280723-281416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280723-281 41 6 bp Feature: gene Location: 281576-282256 bp Ori: BBU64667.1 Feature: domain Description: HNHc Note: nucleases Location: 281972-282137 bp Feature: domain Description: HNHc Note: nucleases Location: 281 972-2821 37 bp Feature: gene Location: 282417-282584 bp Feature: gene Location: 2637882-2638235 bp Ori: BBU66961.1 Gene: dinJ Feature: domain Description: RelB_DinJ Location: 2638101-2638227 bp Feature: domain Description: RelB_DinJ Location: 26381 01 -2638227 bp Feature: gene Location: 2638343-2639320 bp Ori: BBU66962.1 Feature: domain Description: FtsK_SpoIIIE Location: 2638961-2639201 bp Feature: domain Description: FtsK_SpoIIIE Location: 2638961 -2639201 bp Feature: gene Location: 2639986-2641788 bp Ori: BBU66963.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2640280-2640976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2640280-2640976 bp Feature: domain Description: HNHc Note: nucleases Location: 2641516-2641675 bp Feature: domain Description: HNHc Note: nucleases Location: 2641 51 6-2641 675 bp Feature: gene Location: 2641890-2642270 bp Ori: BBU66964.1 Feature: domain Description: FtsK Location: 2641905-2642145 bp Feature: domain Description: FtsK Location: 2641 905-26421 45 bp Feature: gene Location: 2642315-2643457 bp Ori: BBU66965.1 Feature: domain Description: Dcm Location: 2642318-2643431 bp Feature: domain Description: Dcm Location: 264231 8-2643431 bp Feature: gene Location: 2643587-2643736 bp Feature: gene Location: 2643991-2645175 bp Ori: BBU66968.1 Feature: domain Description: HTH_XRE Location: 2644021-2644165 bp Feature: domain Description: HTH_XRE Location: 2644021 -26441 65 bp Feature: domain Description: Rol_Rep_N Location: 2644198-2644462 bp Feature: domain Description: Rol_Rep_N Location: 26441 98-2644462 bp Feature: domain Description: Rep_trans Location: 2644486-2645098 bp Feature: domain Description: Rep_trans Location: 2644486-2645098 bp Feature: gene Location: 2646055-2647965 bp Ori: BBU66969.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2646388-2647126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2646388-26471 26 bp Feature: domain Description: HNHc Note: nucleases Location: 2647681-2647846 bp Feature: domain Description: HNHc Note: nucleases Location: 2647681 -2647846 bp Feature: gene Location: 2648306-2648809 bp Ori: BBU66970.1 Gene: ardA Feature: domain Description: ArdA Location: 2648324-2648795 bp Feature: domain Description: ArdA Location: 2648324-2648795 bp Feature: gene Location: 2648935-2649972 bp Ori: BBU66971.1 Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 2649028-2649445 bp Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 2649028-2649445 bp Feature: gene Location: 2655877-2657985 bp Feature: gene Location: 2657982-2658932 bp Ori: BBU66978.1 Feature: domain Description: Lysozyme_like Location: 2658129-2658591 bp Feature: domain Description: Lysozyme_like Location: 26581 29-2658591 bp Feature: domain Description: Spr Location: 2658618-2658915 bp Feature: domain Description: Spr Location: 265861 8-265891 5 bp Feature: gene Location: 2659646-2660437 bp Ori: BBU66979.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2659961-2660402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2659961 -2660402 bp Feature: gene Location: 2660470-2661474 bp Ori: BBU66980.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660479-2660659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2660479-2660659 bp Feature: domain Description: HNHc Note: nucleases Location: 2661184-2661349 bp Feature: domain Description: HNHc Note: nucleases Location: 2661 1 84-2661 349 bp Feature: gene Location: 2661651-2662562 bp Ori: BBU66981.1 Feature: domain Description: TpcC Location: 2661882-2662548 bp Feature: domain Description: TpcC Location: 2661 882-2662548 bp Feature: gene Location: 2662982-2663197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), FtsK (COG1674), Dcm (COG0270), ArdA (pfam07275)
NT_2-5OAS_ClassI-CCAase (cd05400), Lysozyme_like (pfam13702), Spr (COG0791), TpcC (pfam12642)