myRT

myRT report for GCA_010119975.1_ASM1011997v1

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Seq: CP048222.1 Rhodocytophaga sp. 172606-1 chromosome, complete genome (8983451 bp)
Overview 1 RT 1: 1272093-1275531 bp 2 RT 2: 5758541-5767202 bp Neighborhood of RT #1 [1272093, 1275758] RVT-GII GIIM McrA recomb_XerD Zn_Tnp_IS91 Y2_Tnp Neighborhood of RT #2 [5758541, 5767202] CreD RVT-Retrons Feature: gene Location: 1272093-1272563 bp Feature: gene Location: 1272689-1273138 bp Feature: gene Location: 1273249-1274163 bp Ori: QHT66156.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1273255-1273438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 273255-1 273438 bp Feature: domain Description: GIIM Note: maturase Location: 1273540-1273774 bp Feature: domain Description: GIIM Note: maturase Location: 1 273540-1 273774 bp Feature: domain Description: McrA Location: 1273834-1274119 bp Feature: domain Description: McrA Location: 1 273834-1 2741 1 9 bp Feature: gene Location: 1274122-1274589 bp Ori: QHT66157.1 Feature: domain Description: recomb_XerD Location: 1274284-1274530 bp Feature: domain Description: recomb_XerD Location: 1 274284-1 274530 bp Feature: gene Location: 1274586-1275758 bp Ori: QHT66158.1 Feature: domain Description: Zn_Tnp_IS91 Location: 1274616-1274883 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1 27461 6-1 274883 bp Feature: domain Description: Y2_Tnp Location: 1275009-1275531 bp Feature: domain Description: Y2_Tnp Location: 1 275009-1 275531 bp Feature: gene Location: 5758541-5759971 bp Ori: QHT69445.1 Gene: creD Feature: domain Description: CreD Location: 5758607-5759936 bp Feature: domain Description: CreD Location: 5758607-5759936 bp Feature: gene Location: 5760108-5760752 bp Feature: gene Location: 5760852-5762255 bp Ori: QHT69447.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5761398-5762022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5761 398-5762022 bp Feature: gene Location: 5762498-5764132 bp Feature: gene Location: 5764419-5767202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), recomb_XerD (TIGR02225), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), CreD (pfam06123), RVT-Retrons