myRT

myRT report for GCA_010120755.1_ASM1012075v1

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Seq: CP039729.1 Enterococcus faecium strain ZY2 chromosome, complete genome (2736723 bp)
Overview 1 RT 1: 2611340-2616144 bp Neighborhood of RT #1 [2611340, 2616158] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 2611340-2612524 bp Ori: QHT44584.1 Feature: domain Description: HTH_XRE Location: 2611370-2611514 bp Feature: domain Description: HTH_XRE Location: 261 1 370-261 1 51 4 bp Feature: domain Description: Rol_Rep_N Location: 2611547-2611811 bp Feature: domain Description: Rol_Rep_N Location: 261 1 547-261 1 81 1 bp Feature: domain Description: Rep_trans Location: 2611835-2612447 bp Feature: domain Description: Rep_trans Location: 261 1 835-261 2447 bp Feature: gene Location: 2612521-2612658 bp Ori: QHT44585.1 Feature: domain Description: DUF3789 Location: 2612548-2612641 bp Feature: domain Description: DUF3789 Location: 261 2548-261 2641 bp Feature: gene Location: 2613404-2615314 bp Ori: QHT44586.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2613737-2614475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 3737-261 4475 bp Feature: domain Description: HNHc Note: nucleases Location: 2615030-2615195 bp Feature: domain Description: HNHc Note: nucleases Location: 261 5030-261 51 95 bp Feature: gene Location: 2615418-2615642 bp Feature: gene Location: 2615655-2616158 bp Ori: QHT44587.1 Feature: domain Description: ArdA Location: 2615673-2616144 bp Feature: domain Description: ArdA Location: 261 5673-261 61 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275)