myRT

myRT report for GCA_010365285.1_ASM1036528v1

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Seq: CP048287.1 Paenibacillus sp. 14171R-81 plasmid unnamed1, complete sequence (246230 bp)
Overview 1 RT 1: 24413-34344 bp Neighborhood of RT #1 [24413, 35027] PulO RVT-GII HNHc Cu_amine_oxidN1 Feature: gene Location: 24413-25069 bp Ori: QHW35424.1 Feature: domain Description: PulO Location: 24530-25034 bp Feature: domain Description: PulO Location: 24530-25034 bp Feature: gene Location: 25268-26680 bp Feature: gene Location: 26733-28493 bp Ori: QHW35426.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26991-27690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26991 -27690 bp Feature: domain Description: HNHc Note: nucleases Location: 28245-28383 bp Feature: domain Description: HNHc Note: nucleases Location: 28245-28383 bp Feature: gene Location: 29207-34096 bp Feature: gene Location: 34104-35027 bp Ori: QHW35428.1 Feature: domain Description: Cu_amine_oxidN1 Location: 34197-34344 bp Feature: domain Description: Cu_amine_oxidN1 Location: 341 97-34344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulO (COG1989), RVT-GII, HNHc (smart00507), Cu_amine_oxidN1 (pfam07833)

Seq: CP048286.1 Paenibacillus sp. 14171R-81 chromosome, complete genome (7049254 bp)
Overview 1 RT 1: 2198623-2207277 bp 2 RT 2: 4286578-4292290 bp 3 RT 3: 5138173-5154952 bp Neighborhood of RT #1 [2198623, 2207285] PotC PurR RVT-GII GIIM PRK03739 GerA Neighborhood of RT #2 [4286578, 4292298] drrA ABC2_membrane RVT-GII GIIM MPP_PPP_family PurR Neighborhood of RT #3 [5138173, 5154957] Cu_amine_oxidN1 RVT-GII HNHc PTZ00447 WIAG-tail Feature: gene Location: 2198623-2199447 bp Ori: QHW31156.1 Feature: domain Description: PotC Location: 2198656-2199412 bp Feature: domain Description: PotC Location: 2 198656-2 199412 bp Feature: gene Location: 2199551-2200630 bp Ori: QHW31157.1 Feature: domain Description: PurR Location: 2199602-2200598 bp Feature: domain Description: PurR Location: 2 199602 -2 2 00598 bp Feature: gene Location: 2201840-2203132 bp Ori: QHW31158.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2202140-2202773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 02 140-2 2 02 773 bp Feature: domain Description: GIIM Note: maturase Location: 2202863-2203076 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 02 863-2 2 03076 bp Feature: gene Location: 2203786-2205444 bp Ori: QHW31159.1 Gene: leuA Feature: domain Description: PRK03739 Location: 2203795-2205436 bp Feature: domain Description: PRK03739 Location: 2 2 03795-2 2 05436 bp Feature: gene Location: 2205957-2207285 bp Ori: QHW31160.1 Feature: domain Description: GerA Location: 2206188-2207277 bp Feature: domain Description: GerA Location: 2 2 06188-2 2 072 77 bp Feature: gene Location: 4286578-4287339 bp Ori: QHW32739.1 Feature: domain Description: drrA Location: 4286617-4287277 bp Feature: domain Description: drrA Location: 42 86617-42 872 77 bp Feature: gene Location: 4287341-4288111 bp Ori: QHW32740.1 Feature: domain Description: ABC2_membrane Location: 4287380-4288001 bp Feature: domain Description: ABC2 _membrane Location: 42 87380-42 88001 bp Feature: gene Location: 4288833-4290158 bp Ori: QHW32741.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4289097-4289718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 89097-42 89718 bp Feature: domain Description: GIIM Note: maturase Location: 4289763-4289997 bp Feature: domain Description: GIIM Note: maturase Location: 42 89763-42 89997 bp Feature: gene Location: 4290378-4291115 bp Ori: QHW32742.1 Feature: domain Description: MPP_PPP_family Location: 4290405-4291041 bp Feature: domain Description: MPP_PPP_family Location: 42 90405-42 91041 bp Feature: gene Location: 4291273-4292298 bp Ori: QHW32743.1 Feature: domain Description: PurR Location: 4291282-4292290 bp Feature: domain Description: PurR Location: 42 912 82 -42 92 2 90 bp Feature: gene Location: 5138173-5139096 bp Ori: QHW33399.1 Feature: domain Description: Cu_amine_oxidN1 Location: 5138287-5138413 bp Feature: domain Description: Cu_amine_oxidN1 Location: 51382 87-5138413 bp Feature: gene Location: 5139099-5144528 bp Feature: gene Location: 5145242-5147002 bp Ori: QHW33401.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5145500-5146199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5145500-5146199 bp Feature: domain Description: HNHc Note: nucleases Location: 5146754-5146892 bp Feature: domain Description: HNHc Note: nucleases Location: 5146754-5146892 bp Feature: gene Location: 5147055-5148470 bp Feature: gene Location: 5148646-5154957 bp Ori: QHW33403.1 Feature: domain Description: PTZ00447 Location: 5149498-5149630 bp Feature: domain Description: PTZ00447 Location: 5149498-5149630 bp Feature: domain Description: WIAG-tail Location: 5154715-5154952 bp Feature: domain Description: WIAG-tail Location: 5154715-5154952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PotC (COG1177), PurR (COG1609), RVT-GII, GIIM (pfam08388), PRK03739 (2-isopropylmalate synthase; Validated), GerA (pfam03323), drrA (TIGR01188), ABC2_membrane (pfam01061), MPP_PPP_family (cd00144), Cu_amine_oxidN1 (pfam07833)
HNHc (smart00507), PTZ00447 (apical membrane antigen 1-like protein; Provisional), WIAG-tail (NF012201)