myRT

myRT report for GCA_010365305.1_ASM1036530v1

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Seq: CP048279.1 Staphylococcus sp. MI 10-1553 chromosome, complete genome (2896994 bp)
Overview 1 RT 1: 482349-486501 bp 2 RT 2: 820572-826342 bp 3 RT 3: 1177107-1182953 bp 4 RT 4: 1198875-1206380 bp 5 RT 5: 1249862-1256661 bp 6 RT 6: 1365898-1369935 bp Neighborhood of RT #1 [482349, 486512] IstB_IS21 rve RVT-GII PRK13313 Neighborhood of RT #2 [820572, 826344] PI3_PI4_kinase RVT-GII MFS_1 PRK13608 Neighborhood of RT #3 [1177107, 1182958] FieF XRE RVT-GII GIIM YheB PRK13676 Neighborhood of RT #4 [1198875, 1206469] PRK11883 YdeN RVT-GII GIIM Arm-DNA-bind_4 XerC DUF812 HIRAN Neighborhood of RT #5 [1249862, 1256792] COG4584 Arm-DNA-bind_4 RVT-GII GIIM COG3547 COG3666 DDE_Tnp_1_6 Neighborhood of RT #6 [1365898, 1369935] phageSPP1_gp7 Ntox50 RVT-GII GIIM DUF4355 Feature: gene Location: 482349-483092 bp Ori: QHW36243.1 Feature: domain Description: IstB_IS21 Location: 482535-483051 bp Feature: domain Description: IstB_IS21 Location: 482535-483051 bp Feature: gene Location: 483082-484617 bp Ori: QHW36244.1 Feature: domain Description: rve Location: 483496-483883 bp Feature: domain Description: rve Location: 483496-483883 bp Feature: gene Location: 484793-485508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485021-485282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485021 -485282 bp Feature: gene Location: 485711-486016 bp Feature: gene Location: 486183-486512 bp Ori: QHW36246.1 Feature: domain Description: PRK13313 Location: 486186-486501 bp Feature: domain Description: PRK1 331 3 Location: 4861 86-486501 bp Feature: gene Location: 820572-821369 bp Ori: QHW36502.1 Feature: domain Description: PI3_PI4_kinase Location: 820917-821154 bp Feature: domain Description: PI3_PI4_kinase Location: 82091 7-821 1 54 bp Feature: gene Location: 821375-822097 bp Feature: gene Location: 822637-823843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822853-822979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822853-822979 bp Feature: gene Location: 824007-825191 bp Ori: QHW36504.1 Feature: domain Description: MFS_1 Location: 824061-825063 bp Feature: domain Description: MFS_1 Location: 824061 -825063 bp Feature: gene Location: 825169-826344 bp Ori: QHW36505.1 Feature: domain Description: PRK13608 Location: 825172-826342 bp Feature: domain Description: PRK1 3608 Location: 8251 72-826342 bp Feature: gene Location: 1177107-1178015 bp Ori: QHW36794.1 Feature: domain Description: FieF Location: 1177131-1177986 bp Feature: domain Description: FieF Location: 1 1 771 31 -1 1 77986 bp Feature: gene Location: 1178869-1179333 bp Ori: QHW36795.1 Feature: domain Description: XRE Location: 1178902-1179175 bp Feature: domain Description: XRE Location: 1 1 78902-1 1 791 75 bp Feature: gene Location: 1179901-1181187 bp Ori: QHW38366.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1180117-1180732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 801 1 7-1 1 80732 bp Feature: domain Description: GIIM Note: maturase Location: 1180795-1181023 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 80795-1 1 81 023 bp Feature: gene Location: 1181395-1182525 bp Ori: QHW36796.1 Feature: domain Description: YheB Location: 1181398-1182523 bp Feature: domain Description: YheB Location: 1 1 81 398-1 1 82523 bp Feature: gene Location: 1182614-1182958 bp Ori: QHW36797.1 Feature: domain Description: PRK13676 Location: 1182617-1182953 bp Feature: domain Description: PRK1 3676 Location: 1 1 8261 7-1 1 82953 bp Feature: gene Location: 1198875-1200278 bp Ori: QHW36811.1 Feature: domain Description: PRK11883 Location: 1198884-1200267 bp Feature: domain Description: PRK1 1 883 Location: 1 1 98884-1 200267 bp Feature: gene Location: 1200541-1201095 bp Ori: QHW36812.1 Feature: domain Description: YdeN Location: 1200544-1201057 bp Feature: domain Description: YdeN Location: 1 200544-1 201 057 bp Feature: gene Location: 1201768-1203054 bp Ori: QHW38367.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1201984-1202599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 201 984-1 202599 bp Feature: domain Description: GIIM Note: maturase Location: 1202662-1202890 bp Feature: domain Description: GIIM Note: maturase Location: 1 202662-1 202890 bp Feature: gene Location: 1204268-1205314 bp Ori: QHW36813.1 Feature: domain Description: Arm-DNA-bind_4 Location: 1204358-1204436 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1 204358-1 204436 bp Feature: domain Description: XerC Location: 1204448-1205285 bp Feature: domain Description: XerC Location: 1 204448-1 205285 bp Feature: gene Location: 1205450-1206469 bp Ori: QHW36814.1 Feature: domain Description: DUF812 Location: 1205702-1206098 bp Feature: domain Description: DUF81 2 Location: 1 205702-1 206098 bp Feature: domain Description: HIRAN Location: 1206212-1206380 bp Feature: domain Description: HIRAN Location: 1 20621 2-1 206380 bp Feature: gene Location: 1249862-1251097 bp Feature: domain Description: COG4584 Location: 1249901-1250606 bp Feature: domain Description: COG4584 Location: 1 249901 -1 250606 bp Feature: gene Location: 1251221-1251472 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1251311-1251389 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1 251 31 1 -1 251 389 bp Feature: gene Location: 1252073-1253359 bp Ori: QHW38370.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252289-1252904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 252289-1 252904 bp Feature: domain Description: GIIM Note: maturase Location: 1252967-1253195 bp Feature: domain Description: GIIM Note: maturase Location: 1 252967-1 2531 95 bp Feature: gene Location: 1253620-1254828 bp Ori: QHW36866.1 Feature: domain Description: COG3547 Location: 1253641-1254664 bp Feature: domain Description: COG3547 Location: 1 253641 -1 254664 bp Feature: gene Location: 1255101-1256792 bp Ori: QHW36867.1 Feature: domain Description: COG3666 Location: 1255104-1255575 bp Feature: domain Description: COG3666 Location: 1 2551 04-1 255575 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1256277-1256661 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 256277-1 256661 bp Feature: gene Location: 1365898-1366944 bp Ori: QHW38383.1 Feature: domain Description: phageSPP1_gp7 Location: 1366162-1366483 bp Feature: domain Description: phageSPP1 _gp7 Location: 1 3661 62-1 366483 bp Feature: domain Description: Ntox50 Location: 1366621-1366921 bp Feature: domain Description: Ntox50 Location: 1 366621 -1 366921 bp Feature: gene Location: 1366941-1367135 bp Feature: gene Location: 1367685-1368971 bp Ori: QHW38384.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1367901-1368516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 367901 -1 36851 6 bp Feature: domain Description: GIIM Note: maturase Location: 1368579-1368807 bp Feature: domain Description: GIIM Note: maturase Location: 1 368579-1 368807 bp Feature: gene Location: 1369187-1369627 bp Ori: QHW36964.1 Feature: domain Description: DUF4355 Location: 1369298-1369550 bp Feature: domain Description: DUF4355 Location: 1 369298-1 369550 bp Feature: gene Location: 1369642-1369935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), rve (pfam00665), RVT-GII, PRK13313 (staphylobilin-forming heme oxygenase IsdI), PI3_PI4_kinase (pfam00454), MFS_1 (pfam07690), PRK13608 (diacylglycerol glucosyltransferase; Provisional), FieF (COG0053), XRE (COG1476), GIIM (pfam08388)
YheB (COG4399), PRK13676 (YlbF/YmcA family competence regulator), PRK11883 (protoporphyrinogen oxidase; Reviewed), YdeN (COG3545), Arm-DNA-bind_4 (pfam14657), XerC (COG4973), DUF812 (pfam05667), HIRAN (smart00910), COG4584 (Transposase ), COG3547 (Transposase )
COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), phageSPP1_gp7 (TIGR01641), Ntox50 (pfam15542), DUF4355 (pfam14265)