myRT

myRT report for GCA_010365445.1_ASM1036544v1

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Seq: CP048352.1 Raoultella ornithinolytica strain 23 plasmid p23_C, complete sequence (143891 bp)
Overview 1 RT 1: 70835-74356 bp Neighborhood of RT #1 [70835, 74379] PRK10276 RVT-GII StbA Feature: gene Location: 70835-71266 bp Ori: QHW72052.1 Gene: umuD Feature: domain Description: PRK10276 Location: 70883-71249 bp Feature: domain Description: PRK1 0276 Location: 70883-71 249 bp Feature: gene Location: 71244-71359 bp Feature: gene Location: 71672-73159 bp Ori: QHW72053.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72077-72767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72077-72767 bp Feature: gene Location: 73152-73277 bp Feature: gene Location: 73408-74379 bp Ori: QHW72054.1 Feature: domain Description: StbA Location: 73411-74356 bp Feature: domain Description: StbA Location: 7341 1 -74356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406)

Seq: CP048349.1 Raoultella ornithinolytica strain 23 chromosome, complete genome (5725169 bp)
Overview 1 RT 1: 29556-34549 bp 2 RT 2: 2543025-2548468 bp 3 RT 3: 3586691-3591292 bp 4 RT 4: 4547095-4553204 bp Neighborhood of RT #1 [29556, 34551] Acetyltransf_10 TisB_tox RVT-GII IlvB_leader PRK08155 Neighborhood of RT #2 [2543025, 2548500] Lipase_GDSL_2 RVT-GII PRK10276 Neighborhood of RT #3 [3586691, 3591294] PRK10598 pyrC_dimer RVT-GII PRK10597 bssS Neighborhood of RT #4 [4547095, 4553245] GtrA PRK09692 RVT-Retrons Aes Feature: gene Location: 29556-30002 bp Ori: QHW66342.1 Feature: domain Description: Acetyltransf_10 Location: 29673-29973 bp Feature: domain Description: Acetyltransf_10 Location: 2 9673-2 9973 bp Feature: gene Location: 30093-30182 bp Ori: QHW66343.1 Gene: tisB Feature: domain Description: TisB_tox Location: 30096-30180 bp Feature: domain Description: TisB_tox Location: 30096-30180 bp Feature: gene Location: 30818-32305 bp Ori: QHW66344.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31223-31913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312 2 3-31913 bp Feature: gene Location: 32666-32761 bp Ori: QHW66345.1 Gene: ivbL Feature: domain Description: IlvB_leader Location: 32669-32759 bp Feature: domain Description: IlvB_leader Location: 32 669-32 759 bp Feature: gene Location: 32863-34551 bp Ori: QHW66346.1 Gene: ilvB Feature: domain Description: PRK08155 Location: 32866-34549 bp Feature: domain Description: PRK08155 Location: 32 866-34549 bp Feature: gene Location: 2543025-2545373 bp Ori: QHW71390.1 Feature: domain Description: Lipase_GDSL_2 Location: 2544747-2545305 bp Feature: domain Description: Lipase_GDSL_2 Location: 2 544747-2 545305 bp Feature: gene Location: 2545405-2545773 bp Feature: gene Location: 2546376-2547863 bp Ori: QHW68509.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2546781-2547471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 546781-2 547471 bp Feature: gene Location: 2547942-2548181 bp Feature: gene Location: 2548183-2548500 bp Ori: QHW68511.1 Feature: domain Description: PRK10276 Location: 2548189-2548468 bp Feature: domain Description: PRK102 76 Location: 2 548189-2 548468 bp Feature: gene Location: 3586691-3587251 bp Ori: QHW69437.1 Feature: domain Description: PRK10598 Location: 3586694-3587249 bp Feature: domain Description: PRK10598 Location: 3586694-35872 49 bp Feature: gene Location: 3587374-3588420 bp Ori: QHW69438.1 Gene: pyrC Feature: domain Description: pyrC_dimer Location: 3587398-3588415 bp Feature: domain Description: pyrC_dimer Location: 3587398-3588415 bp Feature: gene Location: 3588513-3590000 bp Ori: QHW69439.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3588918-3589608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3588918-3589608 bp Feature: gene Location: 3590402-3590653 bp Ori: QHW69440.1 Gene: dinI Feature: domain Description: PRK10597 Location: 3590405-3590642 bp Feature: domain Description: PRK10597 Location: 3590405-3590642 bp Feature: gene Location: 3591040-3591294 bp Ori: QHW71458.1 Gene: bssS Feature: domain Description: bssS Location: 3591043-3591292 bp Feature: domain Description: bssS Location: 3591043-35912 92 bp Feature: gene Location: 4547095-4547430 bp Ori: QHW71498.1 Feature: domain Description: GtrA Location: 4547098-4547422 bp Feature: domain Description: GtrA Location: 4547098-454742 2 bp Feature: gene Location: 4548051-4548548 bp Feature: domain Description: PRK09692 Location: 4548060-4548543 bp Feature: domain Description: PRK09692 Location: 4548060-4548543 bp Feature: gene Location: 4549066-4550901 bp Ori: QHW70260.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4549201-4549900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45492 01-4549900 bp Feature: gene Location: 4551545-4551931 bp Feature: gene Location: 4552343-4553245 bp Ori: QHW70262.1 Feature: domain Description: Aes Location: 4552484-4553204 bp Feature: domain Description: Aes Location: 4552 484-45532 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), TisB_tox (TIGR04459), RVT-GII, IlvB_leader (pfam08049), PRK08155 (acetolactate synthase large subunit), Lipase_GDSL_2 (pfam13472), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10598 (lipoprotein; Provisional), pyrC_dimer (TIGR00856), PRK10597 (DNA damage-inducible protein I; Provisional)
bssS (PRK12301), GtrA (pfam04138), PRK09692 (Integrase; provisional), RVT-Retrons, Aes (COG0657)