myRT

myRT report for GCA_010669205.1_ASM1066920v1

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Seq: CP048626.1 Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471 chromosome, complete genome (6197116 bp)
Overview 1 RT 1: 704835-709698 bp 2 RT 2: 1009123-1012572 bp 3 RT 3: 1066263-1071991 bp 4 RT 4: 2141526-2147529 bp 5 RT 5: 2405676-2414579 bp 6 RT 6: 2629779-2634695 bp 7 RT 7: 4674497-4677928 bp 8 RT 8: 4690684-4696757 bp Neighborhood of RT #1 [704835, 709766] T4SS-DNA_transf RVT-GII Intron_maturas2 VirD4 DUF4314 Neighborhood of RT #2 [1009123, 1013054] RVT-DGRs Avd_like FGE-sulfatase Neighborhood of RT #3 [1066263, 1072206] galactose_mutarotase_like RVT-GII GIIM HDc PRK09344 Neighborhood of RT #4 [2141526, 2147540] PadR F420_ligase RVT-Retrons YfcE PRK14822 Neighborhood of RT #5 [2405676, 2414623] DUF3801 VirD4 VirD4 RVT-GII Intron_maturas2 TraG-D_C Maff2 RVT-GII HNHc Maff2 TrbL TrbL Neighborhood of RT #6 [2629779, 2634733] T4SS-DNA_transf RVT-GII Intron_maturas2 VirD4 DUF4314 Neighborhood of RT #7 [4674497, 4677948] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII MmcQ Neighborhood of RT #8 [4690684, 4696804] Tra5 RVT-GII GIIM RVT-GII GIIM LolD MacB_PCD SalY SalY Feature: gene Location: 704835-705197 bp Feature: gene Location: 705212-705625 bp Feature: domain Description: T4SS-DNA_transf Location: 705236-705455 bp Feature: domain Description: T4SS-DNA_transf Location: 705236-705455 bp Feature: gene Location: 705733-707619 bp Ori: QIB53990.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706066-706900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706066-706900 bp Feature: domain Description: Intron_maturas2 Location: 706984-707326 bp Feature: domain Description: Intron_maturas2 Location: 706984-707326 bp Feature: gene Location: 708112-709449 bp Ori: QIB58518.1 Feature: domain Description: VirD4 Location: 708289-709420 bp Feature: domain Description: VirD4 Location: 708289-709420 bp Feature: gene Location: 709488-709766 bp Ori: QIB53991.1 Feature: domain Description: DUF4314 Location: 709506-709698 bp Feature: domain Description: DUF431 4 Location: 709506-709698 bp Feature: gene Location: 1009123-1009362 bp Feature: gene Location: 1009490-1009819 bp Feature: gene Location: 1009942-1011105 bp Ori: QIB54245.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1010149-1010812 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 01 01 49-1 01 081 2 bp Feature: gene Location: 1011479-1011928 bp Ori: QIB54246.1 Feature: domain Description: Avd_like Location: 1011545-1011851 bp Feature: domain Description: Avd_like Location: 1 01 1 545-1 01 1 851 bp Feature: gene Location: 1011984-1013054 bp Ori: QIB54247.1 Feature: domain Description: FGE-sulfatase Location: 1012230-1012572 bp Feature: domain Description: FGE-sulfatase Location: 1 01 2230-1 01 2572 bp Feature: gene Location: 1066263-1067327 bp Ori: QIB54304.1 Feature: domain Description: galactose_mutarotase_like Location: 1066323-1067313 bp Feature: domain Description: galactose_mutarotase_like Location: 1 066323-1 06731 3 bp Feature: gene Location: 1067713-1068195 bp Feature: gene Location: 1068320-1069564 bp Ori: QIB54306.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068524-1069181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 068524-1 0691 81 bp Feature: domain Description: GIIM Note: maturase Location: 1069262-1069478 bp Feature: domain Description: GIIM Note: maturase Location: 1 069262-1 069478 bp Feature: gene Location: 1070079-1070351 bp Ori: QIB54307.1 Feature: domain Description: HDc Location: 1070169-1070307 bp Feature: domain Description: HDc Location: 1 0701 69-1 070307 bp Feature: gene Location: 1070515-1072206 bp Ori: QIB54308.1 Feature: domain Description: PRK09344 Location: 1070824-1071991 bp Feature: domain Description: PRK09344 Location: 1 070824-1 071 991 bp Feature: gene Location: 2141526-2141864 bp Ori: QIB55248.1 Feature: domain Description: PadR Location: 2141574-2141778 bp Feature: domain Description: PadR Location: 21 41 574-21 41 778 bp Feature: gene Location: 2142204-2143406 bp Ori: QIB55249.1 Feature: domain Description: F420_ligase Location: 2142237-2143380 bp Feature: domain Description: F420_ligase Location: 21 42237-21 43380 bp Feature: gene Location: 2143746-2144765 bp Ori: QIB55250.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2143911-2144466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 4391 1 -21 44466 bp Feature: gene Location: 2146436-2146918 bp Ori: QIB55251.1 Feature: domain Description: YfcE Location: 2146439-2146883 bp Feature: domain Description: YfcE Location: 21 46439-21 46883 bp Feature: gene Location: 2146941-2147540 bp Ori: QIB55252.1 Feature: domain Description: PRK14822 Location: 2146944-2147529 bp Feature: domain Description: PRK1 4822 Location: 21 46944-21 47529 bp Feature: gene Location: 2405676-2406146 bp Ori: QIB55458.1 Feature: domain Description: DUF3801 Location: 2405760-2406039 bp Feature: domain Description: DUF3801 Location: 2405760-2406039 bp Feature: gene Location: 2406143-2407582 bp Feature: domain Description: VirD4 Location: 2406371-2406686 bp Feature: domain Description: VirD4 Location: 2406371 -2406686 bp Feature: domain Description: VirD4 Location: 2406785-2407583 bp Feature: domain Description: VirD4 Location: 2406785-2407583 bp Feature: gene Location: 2408206-2410026 bp Ori: QIB55459.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2408479-2409307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2408479-2409307 bp Feature: domain Description: Intron_maturas2 Location: 2409388-2409688 bp Feature: domain Description: Intron_maturas2 Location: 2409388-2409688 bp Feature: gene Location: 2410141-2410548 bp Feature: domain Description: TraG-D_C Location: 2410150-2410327 bp Feature: domain Description: TraG-D_C Location: 241 01 50-241 0327 bp Feature: gene Location: 2410787-2410918 bp Ori: QIB55460.1 Feature: domain Description: Maff2 Location: 2410790-2410916 bp Feature: domain Description: Maff2 Location: 241 0790-241 091 6 bp Feature: gene Location: 2411626-2413500 bp Ori: QIB55461.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2411953-2412691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 1 953-241 2691 bp Feature: domain Description: HNHc Note: nucleases Location: 2413234-2413387 bp Feature: domain Description: HNHc Note: nucleases Location: 241 3234-241 3387 bp Feature: gene Location: 2413655-2413753 bp Feature: domain Description: Maff2 Location: 2413658-2413748 bp Feature: domain Description: Maff2 Location: 241 3658-241 3748 bp Feature: gene Location: 2413760-2414623 bp Ori: QIB55462.1 Feature: domain Description: TrbL Location: 2413784-2414000 bp Feature: domain Description: TrbL Location: 241 3784-241 4000 bp Feature: domain Description: TrbL Location: 2414057-2414579 bp Feature: domain Description: TrbL Location: 241 4057-241 4579 bp Feature: gene Location: 2629779-2630228 bp Feature: gene Location: 2630194-2630607 bp Feature: domain Description: T4SS-DNA_transf Location: 2630218-2630437 bp Feature: domain Description: T4SS-DNA_transf Location: 263021 8-2630437 bp Feature: gene Location: 2630715-2632601 bp Ori: QIB55659.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631048-2631882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631 048-2631 882 bp Feature: domain Description: Intron_maturas2 Location: 2631966-2632308 bp Feature: domain Description: Intron_maturas2 Location: 2631 966-2632308 bp Feature: gene Location: 2633094-2634449 bp Ori: QIB58630.1 Feature: domain Description: VirD4 Location: 2633103-2634420 bp Feature: domain Description: VirD4 Location: 26331 03-2634420 bp Feature: gene Location: 2634473-2634733 bp Ori: QIB55660.1 Feature: domain Description: DUF4314 Location: 2634500-2634695 bp Feature: domain Description: DUF431 4 Location: 2634500-2634695 bp Feature: gene Location: 4674497-4674853 bp Ori: QIB57259.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 4674527-4674818 bp Feature: domain Description: TnpB_IS66 Location: 4674527-467481 8 bp Feature: gene Location: 4674939-4676477 bp Ori: QIB57260.1 Feature: domain Description: LZ_Tnp_IS66 Location: 4675011-4675227 bp Feature: domain Description: LZ_Tnp_IS66 Location: 467501 1 -4675227 bp Feature: domain Description: zf-IS66 Location: 4675260-4675389 bp Feature: domain Description: zf-IS66 Location: 4675260-4675389 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4675452-4676304 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4675452-4676304 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4676325-4676448 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4676325-4676448 bp Feature: gene Location: 4676556-4677215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676826-4677216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676826-467721 6 bp Feature: gene Location: 4677350-4677814 bp Feature: gene Location: 4677811-4677948 bp Feature: domain Description: MmcQ Location: 4677817-4677928 bp Feature: domain Description: MmcQ Location: 467781 7-4677928 bp Feature: gene Location: 4690684-4691055 bp Feature: domain Description: Tra5 Location: 4690735-4691017 bp Feature: domain Description: Tra5 Location: 4690735-4691 01 7 bp Feature: gene Location: 4691121-4691577 bp Feature: gene Location: 4692125-4693369 bp Ori: QIB57272.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692329-4692986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692329-4692986 bp Feature: domain Description: GIIM Note: maturase Location: 4693067-4693283 bp Feature: domain Description: GIIM Note: maturase Location: 4693067-4693283 bp Feature: gene Location: 4693446-4694075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693452-4693593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693452-4693593 bp Feature: domain Description: GIIM Note: maturase Location: 4693644-4693860 bp Feature: domain Description: GIIM Note: maturase Location: 4693644-4693860 bp Feature: gene Location: 4694175-4694420 bp Ori: QIB57273.1 Feature: domain Description: LolD Location: 4694232-4694406 bp Feature: domain Description: LolD Location: 4694232-4694406 bp Feature: gene Location: 4694417-4696804 bp Ori: QIB57274.1 Feature: domain Description: MacB_PCD Location: 4694498-4694978 bp Feature: domain Description: MacB_PCD Location: 4694498-4694978 bp Feature: domain Description: SalY Location: 4695014-4695536 bp Feature: domain Description: SalY Location: 469501 4-4695536 bp Feature: domain Description: SalY Location: 4696148-4696757 bp Feature: domain Description: SalY Location: 46961 48-4696757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348), VirD4 (COG3505), DUF4314 (pfam14192), RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781), galactose_mutarotase_like (cd09019), GIIM (pfam08388)
HDc (smart00471), PRK09344 (phosphoenolpyruvate carboxykinase), PadR (pfam03551), F420_ligase (pfam01996), RVT-Retrons, YfcE (COG0622), PRK14822 (XTP/dITP diphosphatase), DUF3801 (pfam12687), TraG-D_C (pfam12696), Maff2 (pfam12750)
HNHc (smart00507), TrbL (pfam04610), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), MmcQ (COG2315), Tra5 (COG2801), LolD (COG1136)
MacB_PCD (pfam12704), SalY (COG0577)