myRT

myRT report for GCA_010669305.1_ASM1066930v1

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Seq: CP048649.1 Aminipila butyrica strain DSM 103574 chromosome, complete genome (3334849 bp)
Overview 1 RT 1: 597224-603375 bp 2 RT 2: 1697554-1704242 bp Neighborhood of RT #1 [597224, 603437] dnaG DUF3991 Toprim_2 VirD4 RVT-GII KOG4768 HNHc VirD4 HTH_36 Neighborhood of RT #2 [1697554, 1704242] tgt TrmA RVT-UG7 Feature: gene Location: 597224-598627 bp Ori: QIB68330.1 Feature: domain Description: dnaG Location: 597374-597539 bp Feature: domain Description: dnaG Location: 597374-597539 bp Feature: domain Description: DUF3991 Location: 597587-597809 bp Feature: domain Description: DUF3991 Location: 597587-597809 bp Feature: domain Description: Toprim_2 Location: 597839-598106 bp Feature: domain Description: Toprim_2 Location: 597839-5981 06 bp Feature: gene Location: 598698-599621 bp Feature: domain Description: VirD4 Location: 598776-599613 bp Feature: domain Description: VirD4 Location: 598776-59961 3 bp Feature: gene Location: 600354-602195 bp Ori: QIB68331.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600654-601386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600654-601 386 bp Feature: domain Description: KOG4768 Location: 601515-601587 bp Feature: domain Description: KOG4768 Location: 601 51 5-601 587 bp Feature: domain Description: HNHc Note: nucleases Location: 601914-602085 bp Feature: domain Description: HNHc Note: nucleases Location: 601 91 4-602085 bp Feature: gene Location: 602336-603169 bp Feature: domain Description: VirD4 Location: 602348-602915 bp Feature: domain Description: VirD4 Location: 602348-60291 5 bp Feature: gene Location: 603183-603437 bp Ori: QIB68332.1 Feature: domain Description: HTH_36 Location: 603225-603375 bp Feature: domain Description: HTH_36 Location: 603225-603375 bp Feature: gene Location: 1697554-1698675 bp Ori: QIB69291.1 Gene: tgt Feature: domain Description: tgt Location: 1697569-1698658 bp Feature: domain Description: tgt Location: 1 697569-1 698658 bp Feature: gene Location: 1698741-1699895 bp Ori: QIB69292.1 Gene: rlmD Feature: domain Description: TrmA Location: 1698750-1699872 bp Feature: domain Description: TrmA Location: 1 698750-1 699872 bp Feature: gene Location: 1700088-1701653 bp Ori: QIB69293.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1700508-1700904 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 700508-1 700904 bp Feature: gene Location: 1701755-1702789 bp Feature: gene Location: 1702920-1704242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), DUF3991 (pfam13154), Toprim_2 (pfam13155), VirD4 (COG3505), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HNHc (smart00507), HTH_36 (pfam13730), tgt (PRK00112), TrmA (COG2265)
RVT-UG7