myRT

myRT report for GCA_010724935.1_ASM1072493v1

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Seq: AP022351.1 Escherichia coli E138 DNA, complete genome (4812157 bp)
Overview 1 RT 1: 2122179-2128443 bp 2 RT 2: 3362345-3371161 bp Neighborhood of RT #1 [2122179, 2128443] PRK11388 RVT-Retrons Neighborhood of RT #2 [3362345, 3371556] LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG1 YeeP AidA AidA Feature: gene Location: 2122179-2124020 bp Ori: BBU75048.1 Feature: domain Description: PRK11388 Location: 2122182-2124012 bp Feature: domain Description: PRK1 1 388 Location: 21 221 82-21 2401 2 bp Feature: gene Location: 2124502-2124741 bp Feature: gene Location: 2125312-2127069 bp Ori: BBU75050.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2125456-2126074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 25456-21 26074 bp Feature: gene Location: 2127091-2127258 bp Feature: gene Location: 2127316-2128443 bp Feature: gene Location: 3362345-3362785 bp Ori: BBU76207.1 Feature: domain Description: LZ_Tnp_IS66 Location: 3362525-3362735 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3362525-3362735 bp Feature: gene Location: 3363361-3363957 bp Ori: BBU76208.1 Feature: domain Description: DDE_Tnp_IS66 Location: 3363388-3363802 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3363388-3363802 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3363826-3363934 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3363826-3363934 bp Feature: gene Location: 3364390-3366861 bp Ori: BBU76209.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3365002-3365512 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3365002-336551 2 bp Feature: gene Location: 3367465-3368337 bp Ori: BBU76210.1 Feature: domain Description: YeeP Location: 3367468-3368335 bp Feature: domain Description: YeeP Location: 3367468-3368335 bp Feature: gene Location: 3368710-3371556 bp Ori: BBU76211.1 Feature: domain Description: AidA Location: 3368749-3370711 bp Feature: domain Description: AidA Location: 3368749-337071 1 bp Feature: domain Description: AidA Location: 3370750-3371161 bp Feature: domain Description: AidA Location: 3370750-3371 1 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG1, YeeP (COG3596), AidA (COG3468)