myRT

myRT report for GCA_010730575.1_ASM1073057v1

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Seq: AP022614.1 Mycobacterium parmense JCM 14742 DNA, nearly complete genome (5952912 bp)
Overview 1 RT 1: 5125279-5131759 bp 2 RT 2: 5198289-5202725 bp Neighborhood of RT #1 [5125279, 5131759] CzcO CzcO Transposase_mut RVT_N RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Neighborhood of RT #2 [5198289, 5202763] MhpC RVT-GII GIIM rve TetR_N TetR_C_35 Feature: gene Location: 5125279-5125866 bp Ori: BBZ47478.1 Feature: domain Description: CzcO Location: 5125282-5125402 bp Feature: domain Description: CzcO Location: 51 25282-51 25402 bp Feature: domain Description: CzcO Location: 5125459-5125759 bp Feature: domain Description: CzcO Location: 51 25459-51 25759 bp Feature: gene Location: 5125962-5127161 bp Ori: BBZ47479.1 Feature: domain Description: Transposase_mut Location: 5126034-5126850 bp Feature: domain Description: Transposase_mut Location: 51 26034-51 26850 bp Feature: gene Location: 5127428-5129143 bp Ori: BBZ47480.1 Feature: domain Description: RVT_N Location: 5127431-5127623 bp Feature: domain Description: RVT_N Location: 51 27431 -51 27623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5127683-5128343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 27683-51 28343 bp Feature: domain Description: GIIM Note: maturase Location: 5128412-5128643 bp Feature: domain Description: GIIM Note: maturase Location: 51 2841 2-51 28643 bp Feature: gene Location: 5129928-5131166 bp Ori: BBZ47481.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 5129940-5130411 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 51 29940-51 3041 1 bp Feature: domain Description: Transposase_20 Location: 5130753-5131005 bp Feature: domain Description: Transposase_20 Location: 51 30753-51 31 005 bp Feature: gene Location: 5131580-5131759 bp Feature: gene Location: 5198289-5199185 bp Ori: BBZ47555.1 Feature: domain Description: MhpC Location: 5198313-5199165 bp Feature: domain Description: MhpC Location: 51 9831 3-51 991 65 bp Feature: gene Location: 5199182-5199448 bp Feature: gene Location: 5199993-5201426 bp Ori: BBZ47557.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5200296-5200983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5200296-5200983 bp Feature: domain Description: GIIM Note: maturase Location: 5201058-5201253 bp Feature: domain Description: GIIM Note: maturase Location: 5201 058-5201 253 bp Feature: gene Location: 5201384-5201842 bp Ori: BBZ47558.1 Feature: domain Description: rve Location: 5201537-5201687 bp Feature: domain Description: rve Location: 5201 537-5201 687 bp Feature: gene Location: 5202107-5202763 bp Ori: BBZ47559.1 Feature: domain Description: TetR_N Location: 5202191-5202323 bp Feature: domain Description: TetR_N Location: 52021 91 -5202323 bp Feature: domain Description: TetR_C_35 Location: 5202392-5202725 bp Feature: domain Description: TetR_C_35 Location: 5202392-5202725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CzcO (COG2072), Transposase_mut (pfam00872), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), MhpC (COG0596), rve (pfam00665), TetR_N (pfam00440)
TetR_C_35 (pfam18556)