myRT

myRT report for GCA_010748935.1_ASM1074893v1

Download annotations/find similar RTs

Seq: CP048796.1 Providencia vermicola strain P8538 chromosome, complete genome (4280811 bp)
Overview 1 RT 1: 1567439-1573998 bp 2 RT 2: 3559689-3563835 bp Neighborhood of RT #1 [1567439, 1574003] DUF927 RVT-UG16 PRK09692 SmpB Neighborhood of RT #2 [3559689, 3563840] PHA02517 RVT-UG4 FimA PRK15276 Feature: gene Location: 1567439-1568200 bp Feature: gene Location: 1568386-1570002 bp Ori: QIC15447.1 Feature: domain Description: DUF927 Location: 1568431-1569187 bp Feature: domain Description: DUF927 Location: 1 568431 -1 5691 87 bp Feature: gene Location: 1570144-1571625 bp Ori: QIC17772.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 1570507-1570909 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 570507-1 570909 bp Feature: gene Location: 1571735-1572943 bp Ori: QIC15448.1 Feature: domain Description: PRK09692 Location: 1571738-1572929 bp Feature: domain Description: PRK09692 Location: 1 571 738-1 572929 bp Feature: gene Location: 1573521-1574003 bp Ori: QIC15449.1 Gene: smpB Feature: domain Description: SmpB Location: 1573554-1573998 bp Feature: domain Description: SmpB Location: 1 573554-1 573998 bp Feature: gene Location: 3559689-3559823 bp Feature: domain Description: PHA02517 Location: 3559692-3559806 bp Feature: domain Description: PHA0251 7 Location: 3559692-3559806 bp Feature: gene Location: 3560880-3561911 bp Feature: gene Location: 3561853-3562764 bp Ori: QIC17092.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3562204-3562645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3562204-3562645 bp Feature: gene Location: 3562757-3563308 bp Ori: QIC17093.1 Feature: domain Description: FimA Location: 3562760-3563306 bp Feature: domain Description: FimA Location: 3562760-3563306 bp Feature: gene Location: 3563316-3563840 bp Ori: QIC17094.1 Feature: domain Description: PRK15276 Location: 3563373-3563835 bp Feature: domain Description: PRK1 5276 Location: 3563373-3563835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF927 (pfam06048), RVT-UG16, PRK09692 (Integrase; provisional), SmpB (pfam01668), PHA02517 (putative transposase OrfB; Reviewed), RVT-UG4, FimA (pfam16970), PRK15276 (putative fimbrial subunit SteE; Provisional)