myRT

myRT report for GCA_010918195.1_ASM1091819v1

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Seq: CP044451.1 Acinetobacter indicus strain MMS9-2 plasmid pMMS9-2-1, complete sequence (121603 bp)
Overview 1 RT 1: 10076-14850 bp Neighborhood of RT #1 [10076, 14948] TnpB_IS66 DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 10076-10465 bp Ori: QIC74901.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 10148-10436 bp Feature: domain Description: TnpB_IS66 Location: 1 01 48-1 0436 bp Feature: gene Location: 10540-11961 bp Feature: domain Description: DUF3287 Location: 10564-10726 bp Feature: domain Description: DUF3287 Location: 1 0564-1 0726 bp Feature: domain Description: LZ_Tnp_IS66 Location: 10753-10978 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 0753-1 0978 bp Feature: domain Description: zf-IS66 Location: 11002-11128 bp Feature: domain Description: zf-IS66 Location: 1 1 002-1 1 1 28 bp Feature: domain Description: DDE_Tnp_IS66 Location: 11170-11962 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 1 70-1 1 962 bp Feature: gene Location: 12537-14198 bp Ori: QIC74902.1 Gene: ltrA Feature: domain Description: RVT_N Location: 12582-12825 bp Feature: domain Description: RVT_N Location: 1 2582-1 2825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12870-13506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2870-1 3506 bp Feature: domain Description: GIIM Note: maturase Location: 13560-13791 bp Feature: domain Description: GIIM Note: maturase Location: 1 3560-1 3791 bp Feature: gene Location: 14303-14530 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 14396-14507 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 4396-1 4507 bp Feature: gene Location: 14709-14948 bp Ori: QIC74903.1 Feature: domain Description: HTH_XRE Location: 14718-14850 bp Feature: domain Description: HTH_XRE Location: 1 471 8-1 4850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)