myRT

myRT report for GCA_010918375.1_ASM1091837v1

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Seq: CP044457.1 Acinetobacter indicus strain B18 plasmid pB18-2, complete sequence (136195 bp)
Overview 1 RT 1: 45524-50298 bp Neighborhood of RT #1 [45524, 50396] TnpB_IS66 DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 45524-45913 bp Ori: QIC71962.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 45596-45884 bp Feature: domain Description: TnpB_IS66 Location: 45596-45884 bp Feature: gene Location: 45988-47409 bp Feature: domain Description: DUF3287 Location: 46012-46174 bp Feature: domain Description: DUF3287 Location: 4601 2-461 74 bp Feature: domain Description: LZ_Tnp_IS66 Location: 46201-46426 bp Feature: domain Description: LZ_Tnp_IS66 Location: 46201 -46426 bp Feature: domain Description: zf-IS66 Location: 46450-46576 bp Feature: domain Description: zf-IS66 Location: 46450-46576 bp Feature: domain Description: DDE_Tnp_IS66 Location: 46618-47410 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4661 8-4741 0 bp Feature: gene Location: 47985-49646 bp Ori: QIC71963.1 Gene: ltrA Feature: domain Description: RVT_N Location: 48030-48273 bp Feature: domain Description: RVT_N Location: 48030-48273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48318-48954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4831 8-48954 bp Feature: domain Description: GIIM Note: maturase Location: 49008-49239 bp Feature: domain Description: GIIM Note: maturase Location: 49008-49239 bp Feature: gene Location: 49751-49978 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 49844-49955 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 49844-49955 bp Feature: gene Location: 50157-50396 bp Ori: QIC71964.1 Feature: domain Description: HTH_XRE Location: 50166-50298 bp Feature: domain Description: HTH_XRE Location: 501 66-50298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)