myRT

myRT report for GCA_010918635.1_ASM1091863v1

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Seq: CP044464.1 Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-1, complete sequence (138456 bp)
Overview 1 RT 1: 3528-8302 bp Neighborhood of RT #1 [3528, 8400] TnpB_IS66 DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 3528-3917 bp Ori: QIC68695.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 3600-3888 bp Feature: domain Description: TnpB_IS66 Location: 3600-3888 bp Feature: gene Location: 3992-5413 bp Feature: domain Description: DUF3287 Location: 4016-4178 bp Feature: domain Description: DUF3287 Location: 401 6-41 78 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4205-4430 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4205-4430 bp Feature: domain Description: zf-IS66 Location: 4454-4580 bp Feature: domain Description: zf-IS66 Location: 4454-4580 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4622-5414 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4622-541 4 bp Feature: gene Location: 5989-7650 bp Ori: QIC68696.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6034-6277 bp Feature: domain Description: RVT_N Location: 6034-6277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6322-6958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6322-6958 bp Feature: domain Description: GIIM Note: maturase Location: 7012-7243 bp Feature: domain Description: GIIM Note: maturase Location: 701 2-7243 bp Feature: gene Location: 7755-7982 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7848-7959 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7848-7959 bp Feature: gene Location: 8161-8400 bp Ori: QIC68697.1 Feature: domain Description: HTH_XRE Location: 8170-8302 bp Feature: domain Description: HTH_XRE Location: 81 70-8302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)