myRT

myRT report for GCA_010918895.1_ASM1091889v1

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Seq: CP044483.1 Acinetobacter schindleri strain HZE30-1 chromosome, complete genome (3097067 bp)
Overview 1 RT 1: 2235908-2246055 bp Neighborhood of RT #1 [2235908, 2246147] metH RVT-UG5 PRK14479 Glutaminase STAS_anti-anti-sigma_factors Feature: gene Location: 2235908-2239594 bp Ori: QIC64803.1 Gene: metH Feature: domain Description: metH Location: 2235917-2239580 bp Feature: domain Description: metH Location: 223591 7-2239580 bp Feature: gene Location: 2239679-2240329 bp Feature: gene Location: 2241853-2242749 bp Ori: QIC64804.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2242378-2242735 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2242378-2242735 bp Feature: gene Location: 2243050-2244780 bp Ori: QIC64805.1 Gene: dhaK Feature: domain Description: PRK14479 Location: 2243053-2244778 bp Feature: domain Description: PRK1 4479 Location: 2243053-2244778 bp Feature: gene Location: 2244873-2246147 bp Ori: QIC64806.1 Feature: domain Description: Glutaminase Location: 2244939-2245785 bp Feature: domain Description: Glutaminase Location: 2244939-2245785 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 2245842-2246055 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 2245842-2246055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT metH (TIGR02082), RVT-UG5, PRK14479 (dihydroxyacetone kinase; Provisional), Glutaminase (pfam04960), STAS_anti-anti-sigma_factors (cd07043)

Seq: CP044485.1 Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence (68525 bp)
Overview 1 RT 1: 2782-8529 bp 2 RT 2: 17893-23734 bp Neighborhood of RT #1 [2782, 8529] TrbC VirB3 RVT_N RVT-GII GIIM VirB4_CagE Neighborhood of RT #2 [17893, 23763] LPD7 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 2782-3087 bp Ori: QIC65743.1 Feature: domain Description: TrbC Location: 2809-3079 bp Feature: domain Description: TrbC Location: 2 809-3079 bp Feature: gene Location: 3087-3413 bp Ori: QIC65744.1 Feature: domain Description: VirB3 Location: 3102-3369 bp Feature: domain Description: VirB3 Location: 3102 -3369 bp Feature: gene Location: 3609-5270 bp Ori: QIC65745.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3654-3897 bp Feature: domain Description: RVT_N Location: 3654-3897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942-4578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942 -4578 bp Feature: domain Description: GIIM Note: maturase Location: 4632-4863 bp Feature: domain Description: GIIM Note: maturase Location: 4632 -4863 bp Feature: gene Location: 5780-8227 bp Ori: QIC65746.1 Feature: domain Description: VirB4_CagE Location: 5849-8183 bp Feature: domain Description: VirB4_CagE Location: 5849-8183 bp Feature: gene Location: 8230-8529 bp Feature: gene Location: 17893-19182 bp Ori: QIC65755.1 Feature: domain Description: LPD7 Location: 18154-18418 bp Feature: domain Description: LPD7 Location: 18154-18418 bp Feature: gene Location: 19288-19515 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19381-19492 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19381-19492 bp Feature: gene Location: 19620-21281 bp Ori: QIC65756.1 Gene: ltrA Feature: domain Description: RVT_N Location: 19665-19908 bp Feature: domain Description: RVT_N Location: 19665-19908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19953-20589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19953-2 0589 bp Feature: domain Description: GIIM Note: maturase Location: 20643-20874 bp Feature: domain Description: GIIM Note: maturase Location: 2 0643-2 0874 bp Feature: gene Location: 21857-23299 bp Feature: domain Description: LZ_Tnp_IS66 Location: 22091-22316 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 2 091-2 2 316 bp Feature: domain Description: zf-IS66 Location: 22340-22466 bp Feature: domain Description: zf-IS66 Location: 2 2 340-2 2 466 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22508-23300 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 508-2 3300 bp Feature: gene Location: 23374-23763 bp Ori: QIC65757.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 23446-23734 bp Feature: domain Description: TnpB_IS66 Location: 2 3446-2 3734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbC (pfam04956), VirB3 (pfam05101), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), VirB4_CagE (TIGR00929), LPD7 (pfam18821), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)

Seq: CP044484.1 Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-1, complete sequence (110146 bp)
Overview 1 RT 1: 102877-107720 bp Neighborhood of RT #1 [102877, 107749] HTH_XRE DDE_Tnp_IS66_C RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 102877-103116 bp Ori: QIC65731.1 Feature: domain Description: HTH_XRE Location: 102886-103018 bp Feature: domain Description: HTH_XRE Location: 102886-103 018 bp Feature: gene Location: 103295-103522 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 103388-103499 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 103 3 88-103 499 bp Feature: gene Location: 103627-105288 bp Ori: QIC65732.1 Gene: ltrA Feature: domain Description: RVT_N Location: 103672-103915 bp Feature: domain Description: RVT_N Location: 103 672-103 915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103960-104596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 960-104596 bp Feature: domain Description: GIIM Note: maturase Location: 104650-104881 bp Feature: domain Description: GIIM Note: maturase Location: 104650-104881 bp Feature: gene Location: 105864-107285 bp Feature: domain Description: DUF3287 Location: 105888-106050 bp Feature: domain Description: DUF3 287 Location: 105888-106050 bp Feature: domain Description: LZ_Tnp_IS66 Location: 106077-106302 bp Feature: domain Description: LZ_Tnp_IS66 Location: 106077-1063 02 bp Feature: domain Description: zf-IS66 Location: 106326-106452 bp Feature: domain Description: zf-IS66 Location: 1063 26-106452 bp Feature: domain Description: DDE_Tnp_IS66 Location: 106494-107286 bp Feature: domain Description: DDE_Tnp_IS66 Location: 106494-107286 bp Feature: gene Location: 107360-107749 bp Ori: QIC65733.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 107432-107720 bp Feature: domain Description: TnpB_IS66 Location: 10743 2-107720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)