myRT

myRT report for GCA_010919095.1_ASM1091909v1

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Seq: CP044475.1 Acinetobacter schindleri strain HZE33-1 plasmid pHZE33-1-1, complete sequence (132305 bp)
Overview 1 RT 1: 66687-71461 bp Neighborhood of RT #1 [66687, 71559] TnpB_IS66 DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 66687-67076 bp Ori: QIC62721.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 66759-67047 bp Feature: domain Description: TnpB_IS66 Location: 66759-67047 bp Feature: gene Location: 67151-68572 bp Feature: domain Description: DUF3287 Location: 67175-67337 bp Feature: domain Description: DUF3287 Location: 671 75-67337 bp Feature: domain Description: LZ_Tnp_IS66 Location: 67364-67589 bp Feature: domain Description: LZ_Tnp_IS66 Location: 67364-67589 bp Feature: domain Description: zf-IS66 Location: 67613-67739 bp Feature: domain Description: zf-IS66 Location: 6761 3-67739 bp Feature: domain Description: DDE_Tnp_IS66 Location: 67781-68573 bp Feature: domain Description: DDE_Tnp_IS66 Location: 67781 -68573 bp Feature: gene Location: 69148-70809 bp Ori: QIC62722.1 Gene: ltrA Feature: domain Description: RVT_N Location: 69193-69436 bp Feature: domain Description: RVT_N Location: 691 93-69436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69481-70117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69481 -701 1 7 bp Feature: domain Description: GIIM Note: maturase Location: 70171-70402 bp Feature: domain Description: GIIM Note: maturase Location: 701 71 -70402 bp Feature: gene Location: 70914-71141 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 71007-71118 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 71 007-71 1 1 8 bp Feature: gene Location: 71320-71559 bp Ori: QIC62723.1 Feature: domain Description: HTH_XRE Location: 71329-71461 bp Feature: domain Description: HTH_XRE Location: 71 329-71 461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)