myRT

myRT report for GCA_011045255.1_ASM1104525v1

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Seq: CP049196.1 Escherichia coli strain E118 chromosome, complete genome (5268889 bp)
Overview 1 RT 1: 253429-257333 bp 2 RT 2: 3489778-3495272 bp 3 RT 3: 4142055-4146338 bp Neighborhood of RT #1 [253429, 257335] InsE PHA02517 RVT-GII GIIM PHA02517 HTH_21 Neighborhood of RT #2 [3489778, 3495292] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Neighborhood of RT #3 [4142055, 4146346] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 253429-253755 bp Feature: domain Description: InsE Location: 253432-253753 bp Feature: domain Description: InsE Location: 253432-253753 bp Feature: gene Location: 253755-254234 bp Feature: domain Description: PHA02517 Location: 253815-254169 bp Feature: domain Description: PHA0251 7 Location: 25381 5-2541 69 bp Feature: gene Location: 254826-256349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255099-255831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255099-255831 bp Feature: domain Description: GIIM Note: maturase Location: 255906-256104 bp Feature: domain Description: GIIM Note: maturase Location: 255906-2561 04 bp Feature: gene Location: 256526-256912 bp Feature: domain Description: PHA02517 Location: 256529-256910 bp Feature: domain Description: PHA0251 7 Location: 256529-25691 0 bp Feature: gene Location: 256952-257335 bp Feature: domain Description: HTH_21 Location: 257276-257333 bp Feature: domain Description: HTH_21 Location: 257276-257333 bp Feature: gene Location: 3489778-3490698 bp Feature: domain Description: AbiEii Location: 3489820-3490561 bp Feature: domain Description: AbiEii Location: 3489820-3490561 bp Feature: gene Location: 3490685-3491488 bp Feature: domain Description: AbiEi_3_N Location: 3490718-3490979 bp Feature: domain Description: AbiEi_3_N Location: 349071 8-3490979 bp Feature: domain Description: AbiEi_3 Location: 3490991-3491447 bp Feature: domain Description: AbiEi_3 Location: 3490991 -3491 447 bp Feature: gene Location: 3491783-3494044 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3492311-3492800 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 349231 1 -3492800 bp Feature: gene Location: 3494179-3494991 bp Feature: domain Description: nitrilase Location: 3494305-3494902 bp Feature: domain Description: nitrilase Location: 3494305-3494902 bp Feature: gene Location: 3495152-3495292 bp Feature: domain Description: Phage_ASH Location: 3495179-3495272 bp Feature: domain Description: Phage_ASH Location: 34951 79-3495272 bp Feature: gene Location: 4142055-4142960 bp Feature: gene Location: 4143098-4143289 bp Feature: gene Location: 4143446-4143985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4143776-4143854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 43776-41 43854 bp Feature: gene Location: 4144013-4144534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4144019-4144301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 4401 9-41 44301 bp Feature: domain Description: GIIM Note: maturase Location: 4144349-4144529 bp Feature: domain Description: GIIM Note: maturase Location: 41 44349-41 44529 bp Feature: gene Location: 4144856-4145044 bp Feature: gene Location: 4145084-4146346 bp Feature: domain Description: YesM Location: 4145597-4146338 bp Feature: domain Description: YesM Location: 41 45597-41 46338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424)
Phage_ASH (pfam10554), YesM (COG2972)