myRT

myRT report for GCA_011045275.1_ASM1104527v1

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Seq: CP049197.1 Escherichia coli strain E597 chromosome, complete genome (5166228 bp)
Overview 1 RT 1: 50737-54641 bp 2 RT 2: 3189317-3195348 bp 3 RT 3: 3838770-3843053 bp Neighborhood of RT #1 [50737, 54643] InsE PHA02517 RVT-GII GIIM PHA02517 HTH_21 Neighborhood of RT #2 [3189317, 3195348] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Neighborhood of RT #3 [3838770, 3843061] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 50737-51063 bp Feature: domain Description: InsE Location: 50740-51061 bp Feature: domain Description: InsE Location: 50740-51 061 bp Feature: gene Location: 51063-51542 bp Feature: domain Description: PHA02517 Location: 51123-51477 bp Feature: domain Description: PHA0251 7 Location: 51 1 23-51 477 bp Feature: gene Location: 52134-53657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52407-53139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52407-531 39 bp Feature: domain Description: GIIM Note: maturase Location: 53214-53412 bp Feature: domain Description: GIIM Note: maturase Location: 5321 4-5341 2 bp Feature: gene Location: 53834-54220 bp Feature: domain Description: PHA02517 Location: 53837-54218 bp Feature: domain Description: PHA0251 7 Location: 53837-5421 8 bp Feature: gene Location: 54260-54643 bp Feature: domain Description: HTH_21 Location: 54584-54641 bp Feature: domain Description: HTH_21 Location: 54584-54641 bp Feature: gene Location: 3189317-3190237 bp Feature: domain Description: AbiEii Location: 3189359-3190100 bp Feature: domain Description: AbiEii Location: 31 89359-31 901 00 bp Feature: gene Location: 3190224-3191027 bp Feature: domain Description: AbiEi_3_N Location: 3190257-3190518 bp Feature: domain Description: AbiEi_3_N Location: 31 90257-31 9051 8 bp Feature: domain Description: AbiEi_3 Location: 3190530-3190986 bp Feature: domain Description: AbiEi_3 Location: 31 90530-31 90986 bp Feature: gene Location: 3191322-3194531 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3191850-3192339 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 31 91 850-31 92339 bp Feature: domain Description: nitrilase Location: 3193845-3194442 bp Feature: domain Description: nitrilase Location: 31 93845-31 94442 bp Feature: gene Location: 3194692-3194832 bp Feature: domain Description: Phage_ASH Location: 3194719-3194812 bp Feature: domain Description: Phage_ASH Location: 31 9471 9-31 9481 2 bp Feature: gene Location: 3194878-3195348 bp Feature: gene Location: 3838770-3839675 bp Feature: gene Location: 3839813-3840004 bp Feature: gene Location: 3840161-3840700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840491-3840569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840491 -3840569 bp Feature: gene Location: 3840728-3841249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840734-3841016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840734-3841 01 6 bp Feature: domain Description: GIIM Note: maturase Location: 3841064-3841244 bp Feature: domain Description: GIIM Note: maturase Location: 3841 064-3841 244 bp Feature: gene Location: 3841571-3841759 bp Feature: gene Location: 3841799-3843061 bp Feature: domain Description: YesM Location: 3842312-3843053 bp Feature: domain Description: YesM Location: 384231 2-3843053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424)
Phage_ASH (pfam10554), YesM (COG2972)