myRT

myRT report for GCA_011045295.1_ASM1104529v1

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Seq: CP049198.1 Escherichia coli strain E686 chromosome, complete genome (5162306 bp)
Overview 1 RT 1: 2891560-2897591 bp 2 RT 2: 3537560-3541843 bp 3 RT 3: 4915693-4919597 bp Neighborhood of RT #1 [2891560, 2897591] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Neighborhood of RT #2 [3537560, 3541851] RVT-GII RVT-GII GIIM YesM Neighborhood of RT #3 [4915693, 4919599] InsE PHA02517 RVT-GII GIIM PHA02517 HTH_21 Feature: gene Location: 2891560-2892480 bp Feature: domain Description: AbiEii Location: 2891602-2892343 bp Feature: domain Description: AbiEii Location: 2891 602-2892343 bp Feature: gene Location: 2892467-2893270 bp Feature: domain Description: AbiEi_3_N Location: 2892500-2892761 bp Feature: domain Description: AbiEi_3_N Location: 2892500-2892761 bp Feature: domain Description: AbiEi_3 Location: 2892773-2893229 bp Feature: domain Description: AbiEi_3 Location: 2892773-2893229 bp Feature: gene Location: 2893565-2896774 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2894093-2894582 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2894093-2894582 bp Feature: domain Description: nitrilase Location: 2896088-2896685 bp Feature: domain Description: nitrilase Location: 2896088-2896685 bp Feature: gene Location: 2896935-2897075 bp Feature: domain Description: Phage_ASH Location: 2896962-2897055 bp Feature: domain Description: Phage_ASH Location: 2896962-2897055 bp Feature: gene Location: 2897121-2897591 bp Feature: gene Location: 3537560-3538465 bp Feature: gene Location: 3538603-3538794 bp Feature: gene Location: 3538951-3539490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3539281-3539359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3539281 -3539359 bp Feature: gene Location: 3539518-3540039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3539524-3539806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3539524-3539806 bp Feature: domain Description: GIIM Note: maturase Location: 3539854-3540034 bp Feature: domain Description: GIIM Note: maturase Location: 3539854-3540034 bp Feature: gene Location: 3540361-3540549 bp Feature: gene Location: 3540589-3541851 bp Feature: domain Description: YesM Location: 3541102-3541843 bp Feature: domain Description: YesM Location: 3541 1 02-3541 843 bp Feature: gene Location: 4915693-4916019 bp Feature: domain Description: InsE Location: 4915696-4916017 bp Feature: domain Description: InsE Location: 491 5696-491 601 7 bp Feature: gene Location: 4916019-4916498 bp Feature: domain Description: PHA02517 Location: 4916079-4916433 bp Feature: domain Description: PHA0251 7 Location: 491 6079-491 6433 bp Feature: gene Location: 4917090-4918613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4917363-4918095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 7363-491 8095 bp Feature: domain Description: GIIM Note: maturase Location: 4918170-4918368 bp Feature: domain Description: GIIM Note: maturase Location: 491 81 70-491 8368 bp Feature: gene Location: 4918790-4919176 bp Feature: domain Description: PHA02517 Location: 4918793-4919174 bp Feature: domain Description: PHA0251 7 Location: 491 8793-491 91 74 bp Feature: gene Location: 4919216-4919599 bp Feature: domain Description: HTH_21 Location: 4919540-4919597 bp Feature: domain Description: HTH_21 Location: 491 9540-491 9597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554), RVT-GII, GIIM (pfam08388), YesM (COG2972), InsE (COG2963)
PHA02517 (putative transposase OrfB; Reviewed), HTH_21 (pfam13276)