myRT

myRT report for GCA_011045775.1_ASM1104577v1

Download annotations/find similar RTs

Seq: CP047337.1 Klebsiella pneumoniae strain 2019036D plasmid p2019036D-mcr8-345kb, complete sequence (345655 bp)
Overview 1 RT 1: 14097-19087 bp 2 RT 2: 192821-197815 bp 3 RT 3: 254015-258108 bp Neighborhood of RT #1 [14097, 19092] Antirestrict RVT-GII PRK10276 umuC Neighborhood of RT #2 [192821, 197817] umuC PRK10276 RVT-GII Antirestrict Neighborhood of RT #3 [254015, 258502] COG3547 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 14097-14522 bp Ori: QIF88127.1 Feature: domain Description: Antirestrict Location: 14232-14520 bp Feature: domain Description: Antirestrict Location: 1 4232-1 4520 bp Feature: gene Location: 15043-15273 bp Feature: gene Location: 15507-16990 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15909-16026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5909-1 6026 bp Feature: gene Location: 17396-17821 bp Ori: QIF88129.1 Gene: umuD Feature: domain Description: PRK10276 Location: 17399-17807 bp Feature: domain Description: PRK1 0276 Location: 1 7399-1 7807 bp Feature: gene Location: 17821-19092 bp Ori: QIF88130.1 Gene: umuC Feature: domain Description: umuC Location: 17824-19087 bp Feature: domain Description: umuC Location: 1 7824-1 9087 bp Feature: gene Location: 192821-194092 bp Ori: QIF88279.1 Gene: umuC Feature: domain Description: umuC Location: 192824-194087 bp Feature: domain Description: umuC Location: 1 92824-1 94087 bp Feature: gene Location: 194092-194517 bp Ori: QIF88280.1 Gene: umuD Feature: domain Description: PRK10276 Location: 194095-194503 bp Feature: domain Description: PRK1 0276 Location: 1 94095-1 94503 bp Feature: gene Location: 194923-196407 bp Ori: QIF88281.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195325-196015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 95325-1 9601 5 bp Feature: gene Location: 196641-196871 bp Feature: gene Location: 197392-197817 bp Ori: QIF88283.1 Feature: domain Description: Antirestrict Location: 197527-197815 bp Feature: domain Description: Antirestrict Location: 1 97527-1 9781 5 bp Feature: gene Location: 254015-255091 bp Ori: QIF88336.1 Feature: domain Description: COG3547 Location: 254054-254975 bp Feature: domain Description: COG3547 Location: 254054-254975 bp Feature: gene Location: 255373-255552 bp Feature: domain Description: PHA02517 Location: 255376-255553 bp Feature: domain Description: PHA0251 7 Location: 255376-255553 bp Feature: gene Location: 255633-257141 bp Ori: QIF88434.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255891-256623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255891 -256623 bp Feature: domain Description: GIIM Note: maturase Location: 256698-256896 bp Feature: domain Description: GIIM Note: maturase Location: 256698-256896 bp Feature: gene Location: 257450-257818 bp Feature: gene Location: 257814-258502 bp Feature: domain Description: InsE Location: 257823-258108 bp Feature: domain Description: InsE Location: 257823-2581 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963)

Seq: CP047338.1 Klebsiella pneumoniae strain 2019036D plasmid p2019036D-50kb, complete sequence (50845 bp)
Overview 1 RT 1: 26585-30660 bp Neighborhood of RT #1 [26585, 31069] COG3547 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 26585-27661 bp Ori: QIF88465.1 Feature: domain Description: COG3547 Location: 26624-27545 bp Feature: domain Description: COG3547 Location: 2 662 4-2 7545 bp Feature: gene Location: 27943-28122 bp Feature: domain Description: PHA02517 Location: 27946-28123 bp Feature: domain Description: PHA02 517 Location: 2 7946-2 812 3 bp Feature: gene Location: 28203-29711 bp Ori: QIF88481.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28461-29193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8461-2 9193 bp Feature: domain Description: GIIM Note: maturase Location: 29268-29466 bp Feature: domain Description: GIIM Note: maturase Location: 2 92 68-2 9466 bp Feature: gene Location: 30020-30391 bp Feature: gene Location: 30384-31069 bp Feature: domain Description: InsE Location: 30396-30660 bp Feature: domain Description: InsE Location: 30396-30660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CP047336.1 Klebsiella pneumoniae strain 2019036D chromosome, complete genome (5369757 bp)
Overview 1 RT 1: 59096-63590 bp 2 RT 2: 1106443-1110613 bp 3 RT 3: 1344157-1348678 bp 4 RT 4: 1464990-1469336 bp 5 RT 5: 1638115-1643223 bp 6 RT 6: 2598813-2602647 bp 7 RT 7: 3033734-3038948 bp 8 RT 8: 3122581-3127615 bp Neighborhood of RT #1 [59096, 63589] InsE PHA02517 RVT-GII PHA02517 HpaE Neighborhood of RT #2 [1106443, 1110618] YbjK int RVT-GII DinI Neighborhood of RT #3 [1344157, 1348680] bssS PRK10597 YkfC RVT-GII PRK05451 PRK10598 Neighborhood of RT #4 [1464990, 1469377] RVT-GII XerC Neighborhood of RT #5 [1638115, 1643225] PinE XerC RVT-GII PRK10276 umuC Neighborhood of RT #6 [2598813, 2602647] InsE YkfC RVT-GII GIIM PHA02517 Neighborhood of RT #7 [3033734, 3038980] MFS_ExuT_GudP_like PRK15440 RVT-GII PRK15440 IclR Neighborhood of RT #8 [3122581, 3127615] SR_ResInv HTH_psq RVT-AbiP2 cupin_WbuC Feature: gene Location: 59096-59809 bp Feature: domain Description: InsE Location: 59120-59405 bp Feature: domain Description: InsE Location: 59120-59405 bp Feature: domain Description: PHA02517 Location: 59555-59810 bp Feature: domain Description: PHA02517 Location: 59555-59810 bp Feature: gene Location: 59751-60173 bp Feature: gene Location: 60482-61992 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60740-61346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60740-613 46 bp Feature: gene Location: 62073-62558 bp Feature: domain Description: PHA02517 Location: 62079-62520 bp Feature: domain Description: PHA02517 Location: 62079-62520 bp Feature: gene Location: 62603-63589 bp Feature: domain Description: HpaE Location: 62615-63590 bp Feature: domain Description: HpaE Location: 62615-63 590 bp Feature: gene Location: 1106443-1107006 bp Ori: QIF84090.1 Feature: domain Description: YbjK Location: 1106449-1106986 bp Feature: domain Description: YbjK Location: 1106449-1106986 bp Feature: gene Location: 1107129-1108181 bp Ori: QIF84091.1 Feature: domain Description: int Location: 1107132-1108131 bp Feature: domain Description: int Location: 110713 2-110813 1 bp Feature: gene Location: 1108280-1110085 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109009-1109693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109009-1109693 bp Feature: gene Location: 1110186-1110374 bp Feature: gene Location: 1110385-1110618 bp Ori: QIF84092.1 Feature: domain Description: DinI Location: 1110427-1110613 bp Feature: domain Description: DinI Location: 1110427-1110613 bp Feature: gene Location: 1344157-1344411 bp Ori: QIF87919.1 Gene: bssS Feature: domain Description: bssS Location: 1344160-1344409 bp Feature: domain Description: bssS Location: 13 44160-13 44409 bp Feature: gene Location: 1344714-1344965 bp Ori: QIF84297.1 Gene: dinI Feature: domain Description: PRK10597 Location: 1344717-1344954 bp Feature: domain Description: PRK10597 Location: 13 44717-13 44954 bp Feature: gene Location: 1345371-1346855 bp Gene: ltrA Feature: domain Description: YkfC Location: 1345641-1345782 bp Feature: domain Description: YkfC Location: 13 45641-13 45782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1345899-1346463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 45899-13 46463 bp Feature: gene Location: 1346948-1347994 bp Ori: QIF84298.1 Gene: pyrC Feature: domain Description: PRK05451 Location: 1346963-1347989 bp Feature: domain Description: PRK05451 Location: 13 46963 -13 47989 bp Feature: gene Location: 1348120-1348680 bp Ori: QIF84299.1 Feature: domain Description: PRK10598 Location: 1348123-1348678 bp Feature: domain Description: PRK10598 Location: 13 48123 -13 48678 bp Feature: gene Location: 1464990-1466084 bp Feature: gene Location: 1466955-1468439 bp Ori: QIF84413.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467357-1468047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14673 57-1468047 bp Feature: gene Location: 1468516-1468752 bp Feature: gene Location: 1468955-1469377 bp Ori: QIF84414.1 Feature: domain Description: XerC Location: 1469030-1469336 bp Feature: domain Description: XerC Location: 146903 0-14693 3 6 bp Feature: gene Location: 1638115-1638576 bp Feature: domain Description: PinE Location: 1638118-1638568 bp Feature: domain Description: PinE Location: 163 8118-163 8568 bp Feature: gene Location: 1638654-1639076 bp Ori: QIF84578.1 Feature: domain Description: XerC Location: 1638690-1639035 bp Feature: domain Description: XerC Location: 163 8690-163 903 5 bp Feature: gene Location: 1639974-1641459 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1640745-1640979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1640745-1640979 bp Feature: gene Location: 1641539-1641958 bp Ori: QIF87932.1 Gene: umuD Feature: domain Description: PRK10276 Location: 1641542-1641953 bp Feature: domain Description: PRK10276 Location: 1641542-1641953 bp Feature: gene Location: 1641960-1643225 bp Ori: QIF84579.1 Gene: umuC Feature: domain Description: umuC Location: 1641963-1643223 bp Feature: domain Description: umuC Location: 1641963 -1643 223 bp Feature: gene Location: 2598813-2599528 bp Feature: domain Description: InsE Location: 2598837-2599122 bp Feature: domain Description: InsE Location: 259883 7-2599122 bp Feature: gene Location: 2599470-2599869 bp Feature: gene Location: 2600180-2601712 bp Gene: ltrA Feature: domain Description: YkfC Location: 2600222-2600339 bp Feature: domain Description: YkfC Location: 2600222-26003 3 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2600501-2601194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2600501-2601194 bp Feature: domain Description: GIIM Note: maturase Location: 2601269-2601467 bp Feature: domain Description: GIIM Note: maturase Location: 2601269-2601467 bp Feature: gene Location: 2601793-2602278 bp Feature: domain Description: PHA02517 Location: 2601799-2602240 bp Feature: domain Description: PHA02517 Location: 2601799-2602240 bp Feature: gene Location: 2602324-2602647 bp Feature: gene Location: 3033734-3035023 bp Ori: QIF88015.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 3033776-3034973 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 3 03 3 776-3 03 4973 bp Feature: gene Location: 3035066-3036121 bp Gene: rhmD Feature: domain Description: PRK15440 Location: 3035072-3036119 bp Feature: domain Description: PRK15440 Location: 3 03 5072-3 03 6119 bp Feature: gene Location: 3036179-3037634 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3036734-3037163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 673 4-3 03 7163 bp Feature: gene Location: 3037999-3038184 bp Ori: QIF85781.1 Feature: domain Description: PRK15440 Location: 3038002-3038149 bp Feature: domain Description: PRK15440 Location: 3 03 8002-3 03 8149 bp Feature: gene Location: 3038195-3038980 bp Ori: QIF85782.1 Feature: domain Description: IclR Location: 3038222-3038948 bp Feature: domain Description: IclR Location: 3 03 8222-3 03 8948 bp Feature: gene Location: 3122581-3122805 bp Feature: gene Location: 3123123-3123665 bp Ori: QIF85863.1 Feature: domain Description: SR_ResInv Location: 3123135-3123501 bp Feature: domain Description: SR_ResInv Location: 3 123 13 5-3 123 501 bp Feature: domain Description: HTH_psq Location: 3123591-3123642 bp Feature: domain Description: HTH_psq Location: 3 123 591-3 123 642 bp Feature: gene Location: 3123754-3125295 bp Ori: QIF85864.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3124183-3124645 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 124183 -3 124645 bp Feature: gene Location: 3125884-3126366 bp Ori: QIF85865.1 Feature: domain Description: cupin_WbuC Location: 3125896-3126280 bp Feature: domain Description: cupin_WbuC Location: 3 125896-3 126280 bp Feature: gene Location: 3126734-3127615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, HpaE (TIGR02299), YbjK (COG3226), int (PHA02601), DinI (pfam06183), bssS (PRK12301), PRK10597 (DNA damage-inducible protein I; Provisional), YkfC (COG3344)
PRK05451 (dihydroorotase; Provisional), PRK10598 (lipoprotein; Provisional), XerC (COG4973), PinE (COG1961), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), GIIM (pfam08388), MFS_ExuT_GudP_like (cd17319), PRK15440 (L-rhamnonate dehydratase; Provisional), IclR (pfam01614)
SR_ResInv (cd03768), HTH_psq (pfam05225), RVT-AbiP2, cupin_WbuC (TIGR04366)