myRT

myRT report for GCA_011064265.1_ASM1106426v1

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Seq: CP049329.1 Flavobacterium sp. Sr18 chromosome, complete genome (3799679 bp)
Overview 1 RT 1: 877551-883149 bp 2 RT 2: 1029265-1033972 bp Neighborhood of RT #1 [877551, 883157] S2P-M50_SpoIVFB_CBS CBS_pair_peptidase_M50 PRK11263 RVT-Retrons YceI DnaJ DnaJ Neighborhood of RT #2 [1029265, 1033983] COG3666 DDE_Tnp_1_6 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 877551-878654 bp Ori: QIH38002.1 Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 877575-878226 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 877575-878226 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 878271-878607 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 878271 -878607 bp Feature: gene Location: 878641-879795 bp Ori: QIH38003.1 Feature: domain Description: PRK11263 Location: 878677-879778 bp Feature: domain Description: PRK1 1 263 Location: 878677-879778 bp Feature: gene Location: 880290-881351 bp Ori: QIH38004.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 880518-881067 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88051 8-881 067 bp Feature: gene Location: 881568-882140 bp Ori: QIH38005.1 Feature: domain Description: YceI Location: 881634-882129 bp Feature: domain Description: YceI Location: 881 634-8821 29 bp Feature: gene Location: 882255-883157 bp Ori: QIH38006.1 Feature: domain Description: DnaJ Location: 882267-882732 bp Feature: domain Description: DnaJ Location: 882267-882732 bp Feature: domain Description: DnaJ Location: 882732-883149 bp Feature: domain Description: DnaJ Location: 882732-8831 49 bp Feature: gene Location: 1029265-1030728 bp Feature: domain Description: COG3666 Location: 1029295-1029745 bp Feature: domain Description: COG3666 Location: 1 029295-1 029745 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1030288-1030651 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 030288-1 030651 bp Feature: gene Location: 1030836-1031360 bp Feature: gene Location: 1031419-1032735 bp Ori: QIH40361.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031614-1032229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 61 4-1 032229 bp Feature: domain Description: GIIM Note: maturase Location: 1032301-1032529 bp Feature: domain Description: GIIM Note: maturase Location: 1 032301 -1 032529 bp Feature: gene Location: 1032866-1033687 bp Ori: QIH38128.1 Feature: domain Description: PHA02517 Location: 1033016-1033661 bp Feature: domain Description: PHA0251 7 Location: 1 03301 6-1 033661 bp Feature: gene Location: 1033705-1033983 bp Ori: QIH38129.1 Feature: domain Description: InsE Location: 1033714-1033972 bp Feature: domain Description: InsE Location: 1 03371 4-1 033972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S2P-M50_SpoIVFB_CBS (cd06164), CBS_pair_peptidase_M50 (cd04801), PRK11263 (cardiolipin synthase ClsB), RVT-Retrons, YceI (smart00867), DnaJ (smart00271), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)