myRT

myRT report for GCA_011065325.1_ASM1106532v1

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Seq: CP047363.1 Macrococcus canis strain Epi0076A chromosome, complete genome (2387408 bp)
Overview 1 RT 1: 495609-500524 bp 2 RT 2: 552732-559113 bp Neighborhood of RT #1 [495609, 500559] GIY-YIG_COG3410 DUF2075 NTP-PPase_RS21-C6_like RVT-Retrons Trypsin_2 MPP_Dcr2 PRK06526 Neighborhood of RT #2 [552732, 559113] KOG3009 RVT-GII GIIM Feature: gene Location: 495609-497297 bp Ori: QIH77553.1 Feature: domain Description: GIY-YIG_COG3410 Location: 495690-495918 bp Feature: domain Description: GIY-YIG_COG341 0 Location: 495690-49591 8 bp Feature: domain Description: DUF2075 Location: 496161-497235 bp Feature: domain Description: DUF2075 Location: 4961 61 -497235 bp Feature: gene Location: 497263-497574 bp Ori: QIH77554.1 Feature: domain Description: NTP-PPase_RS21-C6_like Location: 497302-497551 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 497302-497551 bp Feature: gene Location: 497883-499511 bp Ori: QIH77555.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 498003-498582 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 498003-498582 bp Feature: domain Description: Trypsin_2 Location: 498990-499440 bp Feature: domain Description: Trypsin_2 Location: 498990-499440 bp Feature: gene Location: 499618-499935 bp Ori: QIH77556.1 Feature: domain Description: MPP_Dcr2 Location: 499624-499858 bp Feature: domain Description: MPP_Dcr2 Location: 499624-499858 bp Feature: gene Location: 499915-500559 bp Feature: domain Description: PRK06526 Location: 499972-500524 bp Feature: domain Description: PRK06526 Location: 499972-500524 bp Feature: gene Location: 552732-553487 bp Ori: QIH77612.1 Feature: domain Description: KOG3009 Location: 552741-553251 bp Feature: domain Description: KOG3009 Location: 552741 -553251 bp Feature: gene Location: 553508-553966 bp Feature: gene Location: 554519-555805 bp Ori: QIH77614.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554735-555350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554735-555350 bp Feature: domain Description: GIIM Note: maturase Location: 555410-555608 bp Feature: domain Description: GIIM Note: maturase Location: 55541 0-555608 bp Feature: gene Location: 556239-558695 bp Feature: gene Location: 558958-559113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_COG3410 (cd10439), DUF2075 (pfam09848), NTP-PPase_RS21-C6_like (cd11537), RVT-Retrons, Trypsin_2 (pfam13365), MPP_Dcr2 (cd07383), PRK06526 (transposase; Provisional), KOG3009 (KOG3009, Predicted carbohydrate kinase, contains PfkB domain ), RVT-GII, GIIM (pfam08388)