myRT

myRT report for GCA_011067085.1_ASM1106708v1

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Seq: CP049348.1 Escherichia coli strain 3R chromosome, complete genome (4868512 bp)
Overview 1 RT 1: 314339-324634 bp 2 RT 2: 3304911-3307880 bp 3 RT 3: 3333287-3337887 bp Neighborhood of RT #1 [314339, 324651] Resolvase RVT-Retrons HTH_XRE DUF4062 PRK09692 RVT-UG7 Psu Neighborhood of RT #2 [3304911, 3307945] RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3333287, 3338150] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 314339-315004 bp Feature: domain Description: Resolvase Location: 314360-314777 bp Feature: domain Description: Resolvase Location: 31 4360-31 4777 bp Feature: gene Location: 315053-315235 bp Feature: gene Location: 315272-316978 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 315422-316019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 5422-31 601 9 bp Feature: gene Location: 317115-317612 bp Feature: gene Location: 317852-318313 bp Feature: domain Description: HTH_XRE Location: 317882-318050 bp Feature: domain Description: HTH_XRE Location: 31 7882-31 8050 bp Feature: gene Location: 318344-319525 bp Feature: domain Description: DUF4062 Location: 318359-318686 bp Feature: domain Description: DUF4062 Location: 31 8359-31 8686 bp Feature: gene Location: 320234-321418 bp Feature: domain Description: PRK09692 Location: 320240-321395 bp Feature: domain Description: PRK09692 Location: 320240-321 395 bp Feature: gene Location: 321411-323039 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 321819-322248 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 321 81 9-322248 bp Feature: gene Location: 323036-323776 bp Feature: gene Location: 324079-324651 bp Feature: domain Description: Psu Location: 324097-324634 bp Feature: domain Description: Psu Location: 324097-324634 bp Feature: gene Location: 3304911-3305054 bp Feature: gene Location: 3305079-3305264 bp Feature: gene Location: 3305351-3306874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3305624-3306356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3305624-3306356 bp Feature: domain Description: GIIM Note: maturase Location: 3306431-3306629 bp Feature: domain Description: GIIM Note: maturase Location: 3306431 -3306629 bp Feature: gene Location: 3306828-3307253 bp Feature: gene Location: 3307466-3307945 bp Feature: domain Description: PHA02517 Location: 3307526-3307880 bp Feature: domain Description: PHA0251 7 Location: 3307526-3307880 bp Feature: gene Location: 3333287-3333460 bp Feature: gene Location: 3333494-3333802 bp Feature: gene Location: 3333789-3334952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333903-3334590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333903-3334590 bp Feature: gene Location: 3335278-3335841 bp Feature: domain Description: Inovirus_Gp2 Location: 3335335-3335776 bp Feature: domain Description: Inovirus_Gp2 Location: 3335335-3335776 bp Feature: gene Location: 3336699-3338150 bp Feature: domain Description: DUF3987 Location: 3336810-3337887 bp Feature: domain Description: DUF3987 Location: 333681 0-3337887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-Retrons, HTH_XRE (smart00530), DUF4062 (pfam13271), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)
Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: CP049351.1 Escherichia coli strain 3R plasmid p3R-3, complete sequence (68949 bp)
Overview 1 RT 1: 16971-20574 bp Neighborhood of RT #1 [16971, 20699] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 16971-17228 bp Feature: gene Location: 17259-17534 bp Feature: gene Location: 18108-19775 bp Feature: domain Description: RVT_N Location: 18156-18393 bp Feature: domain Description: RVT_N Location: 18156-18393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18444-19086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18444-19086 bp Feature: domain Description: GIIM Note: maturase Location: 19137-19371 bp Feature: domain Description: GIIM Note: maturase Location: 19137-19371 bp Feature: domain Description: HNHc Note: nucleases Location: 19581-19740 bp Feature: domain Description: HNHc Note: nucleases Location: 19581-19740 bp Feature: gene Location: 20089-20280 bp Feature: gene Location: 20277-20699 bp Feature: domain Description: DUF1380 Location: 20280-20574 bp Feature: domain Description: DUF1380 Location: 2 02 80-2 0574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)