myRT

myRT report for GCA_011106605.1_ASM1110660v1

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Seq: CP040028.1 Klebsiella pneumoniae strain KPC160121 chromosome, complete genome (5382657 bp)
Overview 1 RT 1: 3108626-3111134 bp 2 RT 2: 3310947-3315046 bp 3 RT 3: 3692355-3695793 bp Neighborhood of RT #1 [3108626, 3111134] RVT-GII Neighborhood of RT #2 [3310947, 3315057] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [3692355, 3695843] DinI RVT-GII int Feature: gene Location: 3108626-3108910 bp Feature: gene Location: 3108924-3108995 bp Feature: gene Location: 3108988-3110472 bp Ori: QIJ20719.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3109390-3110080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 09390-31 1 0080 bp Feature: gene Location: 3110472-3110723 bp Feature: gene Location: 3110925-3111134 bp Feature: gene Location: 3310947-3312212 bp Ori: QIJ20926.1 Gene: umuC Feature: domain Description: umuC Location: 3310950-3312210 bp Feature: domain Description: umuC Location: 331 0950-331 221 0 bp Feature: gene Location: 3312215-3312634 bp Ori: QIJ20927.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3312218-3312629 bp Feature: domain Description: PRK1 0276 Location: 331 221 8-331 2629 bp Feature: gene Location: 3312713-3314197 bp Ori: QIJ20928.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3313115-3313805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 31 1 5-331 3805 bp Feature: gene Location: 3314197-3314448 bp Feature: gene Location: 3314815-3315057 bp Ori: QIJ20930.1 Feature: domain Description: DinI Location: 3314866-3315046 bp Feature: domain Description: DinI Location: 331 4866-331 5046 bp Feature: gene Location: 3692355-3692660 bp Ori: QIJ21285.1 Feature: domain Description: DinI Location: 3692469-3692655 bp Feature: domain Description: DinI Location: 3692469-3692655 bp Feature: gene Location: 3692599-3692787 bp Feature: gene Location: 3692888-3694372 bp Ori: QIJ21286.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3693290-3693980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3693290-3693980 bp Feature: gene Location: 3694372-3694623 bp Feature: gene Location: 3694791-3695843 bp Ori: QIJ21288.1 Feature: domain Description: int Location: 3694794-3695793 bp Feature: domain Description: int Location: 3694794-3695793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601)

Seq: CP040030.1 Klebsiella pneumoniae strain KPC160121 plasmid pQnr-L121, complete sequence (148625 bp)
Overview 1 RT 1: 138419-141500 bp Neighborhood of RT #1 [138419, 141514] DUF1472 RVT-GII PRK10276 Feature: gene Location: 138419-138511 bp Feature: domain Description: DUF1472 Location: 138431-138497 bp Feature: domain Description: DUF1472 Location: 138431-138497 bp Feature: gene Location: 138735-138965 bp Feature: gene Location: 139199-140683 bp Ori: QIJ23355.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139601-140291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139601-1402 91 bp Feature: gene Location: 140683-140934 bp Feature: gene Location: 141089-141514 bp Ori: QIJ23357.1 Gene: umuD Feature: domain Description: PRK10276 Location: 141092-141500 bp Feature: domain Description: PRK102 76 Location: 141092 -141500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP040031.1 Klebsiella pneumoniae strain KPC160121 plasmid pOXA48-L121, complete sequence (65499 bp)
Overview 1 RT 1: 14176-17181 bp Neighborhood of RT #1 [14176, 17204] MazE PRK09812 RVT-GII PRK10276 Feature: gene Location: 14176-14433 bp Ori: QIJ23391.1 Feature: domain Description: MazE Location: 14185-14425 bp Feature: domain Description: MazE Location: 14185-14425 bp Feature: gene Location: 14435-14767 bp Ori: QIJ23392.1 Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: gene Location: 14884-16368 bp Ori: QIJ23393.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: gene Location: 16368-16619 bp Feature: gene Location: 16770-17204 bp Ori: QIJ23395.1 Gene: umuD Feature: domain Description: PRK10276 Location: 16818-17181 bp Feature: domain Description: PRK10276 Location: 16818-17181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)