myRT

myRT report for GCA_011106775.1_ASM1110677v1

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Seq: CP040035.1 Klebsiella pneumoniae strain KPC160117 plasmid pQnr-L117, complete sequence (148625 bp)
Overview 1 RT 1: 138419-141500 bp Neighborhood of RT #1 [138419, 141514] DUF1472 RVT-GII PRK10276 Feature: gene Location: 138419-138511 bp Feature: domain Description: DUF1472 Location: 138431-138497 bp Feature: domain Description: DUF1 472 Location: 1 38431 -1 38497 bp Feature: gene Location: 138735-138965 bp Feature: gene Location: 139199-140683 bp Ori: QIJ17751.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139601-140291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39601 -1 40291 bp Feature: gene Location: 140683-140934 bp Feature: gene Location: 141089-141514 bp Ori: QIJ17753.1 Gene: umuD Feature: domain Description: PRK10276 Location: 141092-141500 bp Feature: domain Description: PRK1 0276 Location: 1 41 092-1 41 500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP040033.1 Klebsiella pneumoniae strain KPC160117 chromosome, complete genome (5381963 bp)
Overview 1 RT 1: 3107849-3110357 bp 2 RT 2: 3310170-3314269 bp 3 RT 3: 3691578-3695016 bp Neighborhood of RT #1 [3107849, 3110357] RVT-GII Neighborhood of RT #2 [3310170, 3314280] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [3691578, 3695066] DinI RVT-GII int Feature: gene Location: 3107849-3108133 bp Feature: gene Location: 3108147-3108218 bp Feature: gene Location: 3108211-3109695 bp Ori: QIJ15112.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108613-3109303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108613-3109303 bp Feature: gene Location: 3109695-3109946 bp Feature: gene Location: 3110148-3110357 bp Feature: gene Location: 3310170-3311435 bp Ori: QIJ15319.1 Gene: umuC Feature: domain Description: umuC Location: 3310173-3311433 bp Feature: domain Description: umuC Location: 3310173-3311433 bp Feature: gene Location: 3311438-3311857 bp Ori: QIJ15320.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3311441-3311852 bp Feature: domain Description: PRK102 76 Location: 3311441-3311852 bp Feature: gene Location: 3311936-3313420 bp Ori: QIJ15321.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3312338-3313028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3312 338-331302 8 bp Feature: gene Location: 3313420-3313671 bp Feature: gene Location: 3314038-3314280 bp Ori: QIJ15323.1 Feature: domain Description: DinI Location: 3314089-3314269 bp Feature: domain Description: DinI Location: 3314089-33142 69 bp Feature: gene Location: 3691578-3691883 bp Ori: QIJ15677.1 Feature: domain Description: DinI Location: 3691692-3691878 bp Feature: domain Description: DinI Location: 3691692 -3691878 bp Feature: gene Location: 3691822-3692010 bp Feature: gene Location: 3692111-3693595 bp Ori: QIJ15678.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692513-3693203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692 513-36932 03 bp Feature: gene Location: 3693595-3693846 bp Feature: gene Location: 3694014-3695066 bp Ori: QIJ15680.1 Feature: domain Description: int Location: 3694017-3695016 bp Feature: domain Description: int Location: 3694017-3695016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), int (PHA02601)

Seq: CP040036.1 Klebsiella pneumoniae strain KPC160117 plasmid pOXA48-L117, complete sequence (65499 bp)
Overview 1 RT 1: 14176-17181 bp Neighborhood of RT #1 [14176, 17204] MazE PRK09812 RVT-GII PRK10276 Feature: gene Location: 14176-14433 bp Ori: QIJ17788.1 Feature: domain Description: MazE Location: 14185-14425 bp Feature: domain Description: MazE Location: 14185-14425 bp Feature: gene Location: 14435-14767 bp Ori: QIJ17789.1 Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: gene Location: 14884-16368 bp Ori: QIJ17790.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: gene Location: 16368-16619 bp Feature: gene Location: 16770-17204 bp Ori: QIJ17792.1 Gene: umuD Feature: domain Description: PRK10276 Location: 16818-17181 bp Feature: domain Description: PRK10276 Location: 16818-17181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)