myRT

myRT report for GCA_011106795.1_ASM1110679v1

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Seq: CP040038.1 Klebsiella pneumoniae strain KPC160125 chromosome, complete genome (5405706 bp)
Overview 1 RT 1: 647739-651222 bp 2 RT 2: 1028514-1032622 bp 3 RT 3: 1232437-1234945 bp 4 RT 4: 2939823-2943170 bp 5 RT 5: 2963170-2966124 bp Neighborhood of RT #1 [647739, 651227] int RVT-GII DinI Neighborhood of RT #2 [1028514, 1032624] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1232437, 1234945] RVT-GII Neighborhood of RT #4 [2939823, 2943193] Terminase_2 PRK10276 RVT-GII PRK10276 Neighborhood of RT #5 [2963170, 2966124] MazE PRK09812 RVT-GII Feature: gene Location: 647739-648791 bp Ori: QIJ07480.1 Feature: domain Description: int Location: 647742-648741 bp Feature: domain Description: int Location: 647742-648741 bp Feature: gene Location: 648959-649210 bp Feature: gene Location: 649210-650694 bp Ori: QIJ07482.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649612-650302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64961 2-650302 bp Feature: gene Location: 650795-650983 bp Feature: gene Location: 650922-651227 bp Ori: QIJ07483.1 Feature: domain Description: DinI Location: 651036-651222 bp Feature: domain Description: DinI Location: 651 036-651 222 bp Feature: gene Location: 1028514-1028756 bp Ori: QIJ07839.1 Feature: domain Description: DinI Location: 1028565-1028745 bp Feature: domain Description: DinI Location: 1 028565-1 028745 bp Feature: gene Location: 1029123-1029374 bp Feature: gene Location: 1029374-1030858 bp Ori: QIJ07841.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029776-1030466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029776-1 030466 bp Feature: gene Location: 1030937-1031356 bp Ori: QIJ07842.1 Gene: umuD Feature: domain Description: PRK10276 Location: 1030940-1031351 bp Feature: domain Description: PRK1 0276 Location: 1 030940-1 031 351 bp Feature: gene Location: 1031359-1032624 bp Ori: QIJ07843.1 Gene: umuC Feature: domain Description: umuC Location: 1031362-1032622 bp Feature: domain Description: umuC Location: 1 031 362-1 032622 bp Feature: gene Location: 1232437-1232646 bp Feature: gene Location: 1232848-1233099 bp Feature: gene Location: 1233099-1234583 bp Ori: QIJ08049.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1233501-1234191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 233501 -1 2341 91 bp Feature: gene Location: 1234576-1234647 bp Feature: gene Location: 1234661-1234945 bp Feature: gene Location: 2939823-2940407 bp Ori: QIJ09577.1 Feature: domain Description: Terminase_2 Location: 2939868-2940333 bp Feature: domain Description: Terminase_2 Location: 2939868-2940333 bp Feature: gene Location: 2940465-2940794 bp Ori: QIJ09578.1 Feature: domain Description: PRK10276 Location: 2940471-2940588 bp Feature: domain Description: PRK1 0276 Location: 2940471 -2940588 bp Feature: gene Location: 2940873-2942357 bp Ori: QIJ09579.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941275-2941965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941 275-2941 965 bp Feature: gene Location: 2942357-2942608 bp Feature: gene Location: 2942759-2943193 bp Ori: QIJ09581.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2942807-2943170 bp Feature: domain Description: PRK1 0276 Location: 2942807-29431 70 bp Feature: gene Location: 2963170-2963427 bp Ori: QIJ09608.1 Feature: domain Description: MazE Location: 2963179-2963419 bp Feature: domain Description: MazE Location: 29631 79-296341 9 bp Feature: gene Location: 2963429-2963761 bp Ori: QIJ09609.1 Feature: domain Description: PRK09812 Location: 2963435-2963756 bp Feature: domain Description: PRK0981 2 Location: 2963435-2963756 bp Feature: gene Location: 2963878-2965362 bp Ori: QIJ09610.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2964280-2964970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2964280-2964970 bp Feature: gene Location: 2965362-2965613 bp Feature: gene Location: 2965786-2966124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Terminase_2 (pfam03592), MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin)