myRT

myRT report for GCA_011290585.1_ASM1129058v1

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Seq: CP049800.1 Streptococcus pyogenes strain 1043 chromosome, complete genome (1821897 bp)
Overview 1 RT 1: 510737-522341 bp 2 RT 2: 546351-550621 bp Neighborhood of RT #1 [510737, 522370] COG2433 RVT_N RVT-GII GIIM PHA03411 COG4646 HELICc Cyt_C5_DNA_methylase Neighborhood of RT #2 [546351, 550689] OmpR YozG RVT-GII HNHc Maff2 SSB_OBF Feature: gene Location: 510737-511393 bp Feature: gene Location: 511437-512765 bp Ori: QIK44646.1 Feature: domain Description: COG2433 Location: 511950-512517 bp Feature: domain Description: COG2433 Location: 51 1 950-51 251 7 bp Feature: gene Location: 512899-514569 bp Ori: QIK44647.1 Gene: ltrA Feature: domain Description: RVT_N Location: 512944-513187 bp Feature: domain Description: RVT_N Location: 51 2944-51 31 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513232-513880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 3232-51 3880 bp Feature: domain Description: GIIM Note: maturase Location: 513934-514165 bp Feature: domain Description: GIIM Note: maturase Location: 51 3934-51 41 65 bp Feature: gene Location: 515125-521418 bp Ori: QIK44648.1 Feature: domain Description: PHA03411 Location: 517639-517945 bp Feature: domain Description: PHA0341 1 Location: 51 7639-51 7945 bp Feature: domain Description: COG4646 Location: 518260-520924 bp Feature: domain Description: COG4646 Location: 51 8260-520924 bp Feature: domain Description: HELICc Location: 520972-521338 bp Feature: domain Description: HELICc Location: 520972-521 338 bp Feature: gene Location: 521405-522370 bp Ori: QIK44649.1 Gene: dcm Feature: domain Description: Cyt_C5_DNA_methylase Location: 521420-522341 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 521 420-522341 bp Feature: gene Location: 546351-547043 bp Ori: QIK44670.1 Feature: domain Description: OmpR Location: 546360-547035 bp Feature: domain Description: OmpR Location: 546360-547035 bp Feature: gene Location: 547088-547306 bp Ori: QIK44671.1 Feature: domain Description: YozG Location: 547100-547298 bp Feature: domain Description: YozG Location: 5471 00-547298 bp Feature: gene Location: 547663-549522 bp Ori: QIK44672.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 547981-548719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 547981 -54871 9 bp Feature: domain Description: HNHc Note: nucleases Location: 549250-549412 bp Feature: domain Description: HNHc Note: nucleases Location: 549250-54941 2 bp Feature: gene Location: 550245-550376 bp Ori: QIK44673.1 Feature: domain Description: Maff2 Location: 550248-550374 bp Feature: domain Description: Maff2 Location: 550248-550374 bp Feature: gene Location: 550378-550689 bp Ori: QIK44674.1 Feature: domain Description: SSB_OBF Location: 550402-550621 bp Feature: domain Description: SSB_OBF Location: 550402-550621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2433 (Possible nuclease of RNase H fold, RuvC/YqgF family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), Cyt_C5_DNA_methylase (cl30459), OmpR (COG0745), YozG (COG3655)
HNHc (smart00507), Maff2 (pfam12750), SSB_OBF (cd04496)