myRT

myRT report for GCA_011303755.1_ASM1130375v1

Download annotations/find similar RTs

Seq: CP049885.1 Acidovorax sp. HDW3 chromosome, complete genome (3152246 bp)
Overview 1 RT 1: 919216-932739 bp Neighborhood of RT #1 [919216, 932792] DUF748 DUF748 DUF748 DUF748 OmpA OmpA DUF349 DUF349 DUF349 RVT_N RVT-GII GIIM HNHc RNase_R PRK10565 Feature: gene Location: 919216-922872 bp Ori: QIL43514.1 Feature: domain Description: DUF748 Location: 919672-920113 bp Feature: domain Description: DUF748 Location: 91 9672-9201 1 3 bp Feature: domain Description: DUF748 Location: 920302-920686 bp Feature: domain Description: DUF748 Location: 920302-920686 bp Feature: domain Description: DUF748 Location: 920947-921379 bp Feature: domain Description: DUF748 Location: 920947-921 379 bp Feature: domain Description: DUF748 Location: 921673-922114 bp Feature: domain Description: DUF748 Location: 921 673-9221 1 4 bp Feature: domain Description: OmpA Location: 922339-922495 bp Feature: domain Description: OmpA Location: 922339-922495 bp Feature: domain Description: OmpA Location: 922720-922828 bp Feature: domain Description: OmpA Location: 922720-922828 bp Feature: gene Location: 922998-925652 bp Ori: QIL43515.1 Feature: domain Description: DUF349 Location: 924078-924216 bp Feature: domain Description: DUF349 Location: 924078-92421 6 bp Feature: domain Description: DUF349 Location: 924246-924471 bp Feature: domain Description: DUF349 Location: 924246-924471 bp Feature: domain Description: DUF349 Location: 924504-924657 bp Feature: domain Description: DUF349 Location: 924504-924657 bp Feature: gene Location: 926229-927953 bp Ori: QIL43516.1 Gene: ltrA Feature: domain Description: RVT_N Location: 926286-926520 bp Feature: domain Description: RVT_N Location: 926286-926520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 926577-927222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 926577-927222 bp Feature: domain Description: GIIM Note: maturase Location: 927276-927507 bp Feature: domain Description: GIIM Note: maturase Location: 927276-927507 bp Feature: domain Description: HNHc Note: nucleases Location: 927747-927885 bp Feature: domain Description: HNHc Note: nucleases Location: 927747-927885 bp Feature: gene Location: 928986-931292 bp Ori: QIL43517.1 Gene: rnr Feature: domain Description: RNase_R Location: 929001-931056 bp Feature: domain Description: RNase_R Location: 929001 -931 056 bp Feature: gene Location: 931293-932792 bp Ori: QIL43518.1 Feature: domain Description: PRK10565 Location: 931350-932739 bp Feature: domain Description: PRK1 0565 Location: 931 350-932739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF748 (pfam05359), OmpA (pfam00691), DUF349 (pfam03993), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RNase_R (TIGR02063), PRK10565 (putative carbohydrate kinase; Provisional)