myRT

myRT report for GCA_011305535.1_ASM1130553v1

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Seq: CP049905.1 Diaphorobacter sp. HDW4B chromosome, complete genome (5453503 bp)
Overview 1 RT 1: 3787884-3796266 bp 2 RT 2: 4242233-4251050 bp Neighborhood of RT #1 [3787884, 3796298] rne RVT_N RVT-GII GIIM HNH PRK11025 HAD_like Neighborhood of RT #2 [4242233, 4251050] SWIM RVT-Retrons HEAT_2 Feature: gene Location: 3787884-3791102 bp Ori: QIL71942.1 Feature: domain Description: rne Location: 3787887-3790803 bp Feature: domain Description: rne Location: 3787887-3790803 bp Feature: gene Location: 3791101-3791430 bp Feature: gene Location: 3791836-3793539 bp Ori: QIL71944.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3791890-3792130 bp Feature: domain Description: RVT_N Location: 3791 890-37921 30 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3792181-3792829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37921 81 -3792829 bp Feature: domain Description: GIIM Note: maturase Location: 3792880-3793114 bp Feature: domain Description: GIIM Note: maturase Location: 3792880-37931 1 4 bp Feature: domain Description: HNH Note: nucleases Location: 3793360-3793495 bp Feature: domain Description: HNH Note: nucleases Location: 3793360-3793495 bp Feature: gene Location: 3794612-3795637 bp Ori: QIL71945.1 Feature: domain Description: PRK11025 Location: 3794663-3795608 bp Feature: domain Description: PRK1 1 025 Location: 3794663-3795608 bp Feature: gene Location: 3795630-3796298 bp Ori: QIL71946.1 Feature: domain Description: HAD_like Location: 3795663-3796266 bp Feature: domain Description: HAD_like Location: 3795663-3796266 bp Feature: gene Location: 4242233-4245325 bp Feature: gene Location: 4245334-4247112 bp Ori: QIL72348.1 Feature: domain Description: SWIM Location: 4246879-4246978 bp Feature: domain Description: SWIM Location: 4246879-4246978 bp Feature: gene Location: 4247654-4249669 bp Ori: QIL72349.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4248263-4248890 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4248263-4248890 bp Feature: gene Location: 4249852-4250493 bp Ori: QIL72350.1 Feature: domain Description: HEAT_2 Location: 4250128-4250377 bp Feature: domain Description: HEAT_2 Location: 42501 28-4250377 bp Feature: gene Location: 4250769-4251050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rne (PRK10811), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK11025 (23S rRNA pseudouridine(955/2504/2580) synthase RluC), HAD_like (cl21460), SWIM (pfam04434), RVT-Retrons, HEAT_2 (pfam13646)