myRT

myRT report for GCA_011305775.1_ASM1130577v1

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Seq: CP049908.1 Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence (302741 bp)
Overview 1 RT 1: 234401-240915 bp Neighborhood of RT #1 [234401, 240998] PRK10276 RVT_N RVT-GII GIIM HNHc umuC Toprim_Crpt Toprim_Crpt Toprim_Crpt Feature: gene Location: 234401-235150 bp Feature: gene Location: 235454-235921 bp Ori: QIL78387.1 Gene: umuD Feature: domain Description: PRK10276 Location: 235505-235877 bp Feature: domain Description: PRK1 0276 Location: 235505-235877 bp Feature: gene Location: 236551-238266 bp Ori: QIL78321.1 Gene: ltrA Feature: domain Description: RVT_N Location: 236608-236851 bp Feature: domain Description: RVT_N Location: 236608-236851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236896-237544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236896-237544 bp Feature: domain Description: GIIM Note: maturase Location: 237604-237832 bp Feature: domain Description: GIIM Note: maturase Location: 237604-237832 bp Feature: domain Description: HNHc Note: nucleases Location: 238057-238216 bp Feature: domain Description: HNHc Note: nucleases Location: 238057-23821 6 bp Feature: gene Location: 238317-239618 bp Ori: QIL78322.1 Feature: domain Description: umuC Location: 238353-239613 bp Feature: domain Description: umuC Location: 238353-23961 3 bp Feature: gene Location: 239844-240998 bp Ori: QIL78323.1 Feature: domain Description: Toprim_Crpt Location: 240417-240558 bp Feature: domain Description: Toprim_Crpt Location: 24041 7-240558 bp Feature: domain Description: Toprim_Crpt Location: 240576-240726 bp Feature: domain Description: Toprim_Crpt Location: 240576-240726 bp Feature: domain Description: Toprim_Crpt Location: 240759-240915 bp Feature: domain Description: Toprim_Crpt Location: 240759-24091 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609), Toprim_Crpt (pfam13342)