myRT

myRT report for GCA_011305995.1_ASM1130599v1

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Seq: CP049910.1 Diaphorobacter sp. HDW4A chromosome, complete genome (6477426 bp)
Overview 1 RT 1: 1205474-1210517 bp 2 RT 2: 3027292-3037202 bp 3 RT 3: 3362228-3371657 bp Neighborhood of RT #1 [1205474, 1211238] RVT-UNC COG3666 Neighborhood of RT #2 [3027292, 3037261] NERD UvrD UvrD UvrD RVT-UG8 RVT-UG3 Mrr_cat TIR_2 Piwi_piwi-like_ProArk Neighborhood of RT #3 [3362228, 3371657] COG5340 COG5340 AbiEii RVT-Retrons SWIM Feature: gene Location: 1205474-1205698 bp Feature: gene Location: 1205778-1206590 bp Feature: gene Location: 1206994-1208715 bp Ori: QIL79413.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1207414-1207822 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 20741 4-1 207822 bp Feature: gene Location: 1208712-1209680 bp Feature: gene Location: 1210028-1211238 bp Feature: domain Description: COG3666 Location: 1210040-1210517 bp Feature: domain Description: COG3666 Location: 1 21 0040-1 21 051 7 bp Feature: gene Location: 3027292-3027669 bp Feature: gene Location: 3028034-3029809 bp Ori: QIL83886.1 Feature: domain Description: NERD Location: 3028043-3028346 bp Feature: domain Description: NERD Location: 3028043-3028346 bp Feature: domain Description: UvrD Location: 3028688-3028814 bp Feature: domain Description: UvrD Location: 3028688-302881 4 bp Feature: domain Description: UvrD Location: 3029039-3029573 bp Feature: domain Description: UvrD Location: 3029039-3029573 bp Feature: domain Description: UvrD Location: 3029585-3029756 bp Feature: domain Description: UvrD Location: 3029585-3029756 bp Feature: gene Location: 3029992-3031953 bp Ori: QIL83887.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3030520-3030961 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3030520-3030961 bp Feature: gene Location: 3031961-3033229 bp Ori: QIL80856.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3032252-3032750 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3032252-3032750 bp Feature: gene Location: 3033846-3035666 bp Ori: QIL80857.1 Feature: domain Description: Mrr_cat Location: 3033891-3034230 bp Feature: domain Description: Mrr_cat Location: 3033891 -3034230 bp Feature: domain Description: TIR_2 Location: 3034353-3034698 bp Feature: domain Description: TIR_2 Location: 3034353-3034698 bp Feature: gene Location: 3035681-3037261 bp Ori: QIL80858.1 Feature: domain Description: Piwi_piwi-like_ProArk Location: 3035714-3037202 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 303571 4-3037202 bp Feature: gene Location: 3362228-3363124 bp Ori: QIL81117.1 Feature: domain Description: COG5340 Location: 3362495-3362582 bp Feature: domain Description: COG5340 Location: 3362495-3362582 bp Feature: domain Description: COG5340 Location: 3362801-3362990 bp Feature: domain Description: COG5340 Location: 3362801 -3362990 bp Feature: gene Location: 3363101-3363997 bp Ori: QIL81118.1 Feature: domain Description: AbiEii Location: 3363179-3363923 bp Feature: domain Description: AbiEii Location: 33631 79-3363923 bp Feature: gene Location: 3364200-3366221 bp Ori: QIL81119.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3364803-3365430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3364803-3365430 bp Feature: gene Location: 3366772-3368520 bp Ori: QIL81120.1 Feature: domain Description: SWIM Location: 3368305-3368416 bp Feature: domain Description: SWIM Location: 3368305-336841 6 bp Feature: gene Location: 3368592-3371657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5/RVT-UG17/RVT-UG19/RVT-UG25(RVT-UNC), COG3666 (Transposase ), NERD (pfam08378), UvrD (COG0210), RVT-UG8, RVT-UG3, Mrr_cat (pfam04471), TIR_2 (pfam13676), Piwi_piwi-like_ProArk (cd04659), COG5340 (Transcriptional regulator, predicted component of viral defense system )
AbiEii (pfam08843), RVT-Retrons, SWIM (pfam04434)