myRT

myRT report for GCA_011331065.1_ASM1133106v1

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Seq: CP049081.1 Escherichia coli strain p10A chromosome, complete genome (4764184 bp)
Overview 1 RT 1: 2820575-2824927 bp 2 RT 2: 4087544-4091127 bp 3 RT 3: 4110538-4115143 bp Neighborhood of RT #1 [2820575, 2825037] STALD InsE RVT-GII GIIM PHA02517 Ogr_Delta Neighborhood of RT #2 [4087544, 4091127] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4110538, 4115143] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 2820575-2821216 bp Ori: QIM01470.1 Feature: domain Description: STALD Location: 2820641-2821145 bp Feature: domain Description: STALD Location: 2820641 -2821 1 45 bp Feature: gene Location: 2821225-2821913 bp Feature: domain Description: InsE Location: 2821234-2821519 bp Feature: domain Description: InsE Location: 2821 234-2821 51 9 bp Feature: gene Location: 2822586-2824094 bp Ori: QIM01471.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822844-2823576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822844-2823576 bp Feature: domain Description: GIIM Note: maturase Location: 2823651-2823849 bp Feature: domain Description: GIIM Note: maturase Location: 2823651 -2823849 bp Feature: gene Location: 2824175-2824663 bp Feature: domain Description: PHA02517 Location: 2824178-2824652 bp Feature: domain Description: PHA0251 7 Location: 28241 78-2824652 bp Feature: gene Location: 2824777-2825037 bp Ori: QIL99743.1 Feature: domain Description: Ogr_Delta Location: 2824786-2824927 bp Feature: domain Description: Ogr_Delta Location: 2824786-2824927 bp Feature: gene Location: 4087544-4087801 bp Feature: gene Location: 4087884-4088372 bp Feature: domain Description: PHA02517 Location: 4087887-4088352 bp Feature: domain Description: PHA0251 7 Location: 4087887-4088352 bp Feature: gene Location: 4088453-4089961 bp Ori: QIM01524.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4088711-4089443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408871 1 -4089443 bp Feature: domain Description: GIIM Note: maturase Location: 4089518-4089716 bp Feature: domain Description: GIIM Note: maturase Location: 408951 8-408971 6 bp Feature: gene Location: 4090634-4091059 bp Feature: domain Description: PHA02517 Location: 4090724-4091060 bp Feature: domain Description: PHA0251 7 Location: 4090724-4091 060 bp Feature: gene Location: 4091047-4091127 bp Feature: gene Location: 4110538-4111569 bp Ori: QIM00841.1 Feature: domain Description: LacI Location: 4110580-4110715 bp Feature: domain Description: LacI Location: 41 1 0580-41 1 071 5 bp Feature: domain Description: PBP1_GntR Location: 4110754-4111564 bp Feature: domain Description: PBP1 _GntR Location: 41 1 0754-41 1 1 564 bp Feature: gene Location: 4111697-4112020 bp Feature: gene Location: 4112096-4112902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4112099-4112462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 2099-41 1 2462 bp Feature: domain Description: GIIM Note: maturase Location: 4112510-4112732 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 251 0-41 1 2732 bp Feature: gene Location: 4112920-4113354 bp Ori: QIM01526.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4113112-4113328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 31 1 2-41 1 3328 bp Feature: gene Location: 4114263-4114589 bp Feature: gene Location: 4114799-4115143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STALD (pfam18185), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Ogr_Delta (pfam04606), LacI (pfam00356), PBP1_GntR (cd01575)