myRT

myRT report for GCA_011331215.1_ASM1133121v1

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Seq: CP049085.1 Escherichia coli strain p4A chromosome, complete genome (5255498 bp)
Overview 1 RT 1: 618693-623514 bp 2 RT 2: 2263712-2267683 bp 3 RT 3: 2920594-2927449 bp Neighborhood of RT #1 [618693, 623546] stp PHA02517 RVT-GII GIIM InsE stp Neighborhood of RT #2 [2263712, 2267683] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Neighborhood of RT #3 [2920594, 2927457] RVT-Retrons PRK11388 Feature: gene Location: 618693-619148 bp Feature: domain Description: stp Location: 618792-619143 bp Feature: domain Description: stp Location: 61 8792-61 91 43 bp Feature: gene Location: 619179-619646 bp Feature: domain Description: PHA02517 Location: 619182-619641 bp Feature: domain Description: PHA0251 7 Location: 61 91 82-61 9641 bp Feature: gene Location: 619727-621235 bp Ori: QIM06367.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619985-620717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 9985-62071 7 bp Feature: domain Description: GIIM Note: maturase Location: 620792-620990 bp Feature: domain Description: GIIM Note: maturase Location: 620792-620990 bp Feature: gene Location: 621908-622626 bp Feature: domain Description: InsE Location: 621947-622232 bp Feature: domain Description: InsE Location: 621 947-622232 bp Feature: gene Location: 622668-623546 bp Feature: domain Description: stp Location: 622680-623514 bp Feature: domain Description: stp Location: 622680-62351 4 bp Feature: gene Location: 2263712-2264614 bp Ori: QIM03700.1 Feature: domain Description: Macro_Appr_pase Location: 2263730-2264243 bp Feature: domain Description: Macro_Appr_pase Location: 2263730-2264243 bp Feature: gene Location: 2264623-2265207 bp Ori: QIM03701.1 Feature: domain Description: Caudo_TAP Location: 2264839-2265196 bp Feature: domain Description: Caudo_TAP Location: 2264839-22651 96 bp Feature: gene Location: 2265320-2266690 bp Ori: QIM03702.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2265548-2266154 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2265548-22661 54 bp Feature: gene Location: 2266668-2267219 bp Ori: QIM03703.1 Feature: domain Description: SLATT_5 Location: 2266677-2267190 bp Feature: domain Description: SLATT_5 Location: 2266677-22671 90 bp Feature: gene Location: 2267464-2267683 bp Feature: gene Location: 2920594-2921109 bp Feature: gene Location: 2921106-2922233 bp Feature: gene Location: 2922480-2924237 bp Ori: QIM04287.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2922624-2923242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2922624-2923242 bp Feature: gene Location: 2925262-2925492 bp Feature: gene Location: 2925529-2927457 bp Ori: QIM04289.1 Gene: dhaR Feature: domain Description: PRK11388 Location: 2925541-2927449 bp Feature: domain Description: PRK1 1 388 Location: 2925541 -2927449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT stp (TIGR00814), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160), RVT-Retrons
PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional)