myRT

myRT report for GCA_011388195.1_ASM1138819v1

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Seq: CP049990.1 Pusillimonas sp. DMV24BSW_D chromosome, complete genome (3191899 bp)
Overview 1 RT 1: 1457179-1460494 bp 2 RT 2: 1986130-1991398 bp 3 RT 3: 2481052-2489306 bp 4 RT 4: 2975046-2980426 bp 5 RT 5: 3064492-3070449 bp Neighborhood of RT #1 [1457179, 1460494] 1 1 RVT-DGRs Avd_like Neighborhood of RT #2 [1986130, 1991406] PRK00779 DUF3579 RVT-GII GIIM RpsT MviN Neighborhood of RT #3 [2481052, 2489440] PRK05222 PRK15048 RVT-GII GIIM PBP2_TRAP_DctP1 Met_dep_hydrolase_A Neighborhood of RT #4 [2975046, 2980450] DUF4238 HTH_Tnp_1 RVT-Retrons HTH_Tnp_1 Neighborhood of RT #5 [3064492, 3070469] DDE_Tnp_ISL3 dnaG dnaG group_II_RT_mat RVT-UG6 nitrilase RelB_DinJ Feature: gene Location: 1457179-1457622 bp Feature: gene Location: 1457619-1458293 bp Ori: QIM48958.1 Feature: domain Description: 1 Location: 1457679-1457799 bp Feature: domain Description: 1 Location: 1 457679-1 457799 bp Feature: domain Description: 1 Location: 1457907-1458261 bp Feature: domain Description: 1 Location: 1 457907-1 458261 bp Feature: gene Location: 1458304-1459647 bp Ori: QIM48959.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1458736-1459423 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 458736-1 459423 bp Feature: gene Location: 1459640-1460014 bp Ori: QIM48960.1 Feature: domain Description: Avd_like Location: 1459667-1459973 bp Feature: domain Description: Avd_like Location: 1 459667-1 459973 bp Feature: gene Location: 1460033-1460494 bp Feature: gene Location: 1986130-1987074 bp Ori: QIM49429.1 Gene: argF Feature: domain Description: PRK00779 Location: 1986163-1987054 bp Feature: domain Description: PRK00779 Location: 1 9861 63-1 987054 bp Feature: gene Location: 1987194-1987493 bp Ori: QIM50517.1 Feature: domain Description: DUF3579 Location: 1987203-1987464 bp Feature: domain Description: DUF3579 Location: 1 987203-1 987464 bp Feature: gene Location: 1987910-1989280 bp Ori: QIM49430.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1988243-1988861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 988243-1 988861 bp Feature: domain Description: GIIM Note: maturase Location: 1988918-1989128 bp Feature: domain Description: GIIM Note: maturase Location: 1 98891 8-1 9891 28 bp Feature: gene Location: 1989530-1989796 bp Ori: QIM49431.1 Gene: rpsT Feature: domain Description: RpsT Location: 1989533-1989791 bp Feature: domain Description: RpsT Location: 1 989533-1 989791 bp Feature: gene Location: 1989850-1991406 bp Ori: QIM49432.1 Gene: murJ Feature: domain Description: MviN Location: 1989853-1991398 bp Feature: domain Description: MviN Location: 1 989853-1 991 398 bp Feature: gene Location: 2481052-2483346 bp Ori: QIM49847.1 Gene: metE Feature: domain Description: PRK05222 Location: 2481070-2483308 bp Feature: domain Description: PRK05222 Location: 2481 070-2483308 bp Feature: gene Location: 2483302-2485074 bp Ori: QIM49848.1 Feature: domain Description: PRK15048 Location: 2483590-2484883 bp Feature: domain Description: PRK1 5048 Location: 2483590-2484883 bp Feature: gene Location: 2485242-2486612 bp Ori: QIM49849.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485575-2486193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485575-24861 93 bp Feature: domain Description: GIIM Note: maturase Location: 2486250-2486460 bp Feature: domain Description: GIIM Note: maturase Location: 2486250-2486460 bp Feature: gene Location: 2487077-2488063 bp Ori: QIM49850.1 Feature: domain Description: PBP2_TRAP_DctP1 Location: 2487164-2488046 bp Feature: domain Description: PBP2_TRAP_DctP1 Location: 24871 64-2488046 bp Feature: gene Location: 2488148-2489440 bp Ori: QIM49851.1 Feature: domain Description: Met_dep_hydrolase_A Location: 2488307-2489306 bp Feature: domain Description: Met_dep_hydrolase_A Location: 2488307-2489306 bp Feature: gene Location: 2975046-2976134 bp Ori: QIM50232.1 Feature: domain Description: DUF4238 Location: 2975064-2975808 bp Feature: domain Description: DUF4238 Location: 2975064-2975808 bp Feature: gene Location: 2976288-2976434 bp Ori: QIM50233.1 Feature: domain Description: HTH_Tnp_1 Location: 2976294-2976390 bp Feature: domain Description: HTH_Tnp_1 Location: 2976294-2976390 bp Feature: gene Location: 2976665-2977795 bp Ori: QIM50234.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2976893-2977532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2976893-2977532 bp Feature: gene Location: 2977964-2979202 bp Feature: gene Location: 2980207-2980450 bp Ori: QIM50236.1 Feature: domain Description: HTH_Tnp_1 Location: 2980219-2980426 bp Feature: domain Description: HTH_Tnp_1 Location: 298021 9-2980426 bp Feature: gene Location: 3064492-3064626 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3064495-3064585 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3064495-3064585 bp Feature: gene Location: 3064870-3065934 bp Ori: QIM50299.1 Feature: domain Description: dnaG Location: 3065017-3065173 bp Feature: domain Description: dnaG Location: 306501 7-30651 73 bp Feature: domain Description: dnaG Location: 3065656-3065923 bp Feature: domain Description: dnaG Location: 3065656-3065923 bp Feature: gene Location: 3065927-3069142 bp Ori: QIM50300.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 3065966-3066299 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3065966-3066299 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3066584-3067019 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3066584-306701 9 bp Feature: gene Location: 3069169-3070092 bp Ori: QIM50608.1 Feature: domain Description: nitrilase Location: 3069280-3069877 bp Feature: domain Description: nitrilase Location: 3069280-3069877 bp Feature: gene Location: 3070206-3070469 bp Ori: QIM50609.1 Feature: domain Description: RelB_DinJ Location: 3070209-3070449 bp Feature: domain Description: RelB_DinJ Location: 3070209-3070449 bp Sorry, your browser does not 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Associated domains:myRT 1 (PHA02575), RVT-DGRs, Avd_like (cd16376), PRK00779 (ornithine carbamoyltransferase; Provisional), DUF3579 (pfam12112), RVT-GII, GIIM (pfam08388), RpsT (COG0268), MviN (COG0728), PRK05222 (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional)
PRK15048 (methyl-accepting chemotaxis protein II; Provisional), PBP2_TRAP_DctP1 (cd13667), Met_dep_hydrolase_A (cd01299), DUF4238 (pfam14022), HTH_Tnp_1 (pfam01527), RVT-Retrons, DDE_Tnp_ISL3 (pfam01610), dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG6
nitrilase (cl11424), RelB_DinJ (TIGR02384)