myRT

myRT report for GCA_011403355.1_ASM1140335v1

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Seq: AP021890.1 Escherichia coli 2017.15.01CC DNA, complete genome (4869407 bp)
Overview 1 RT 1: 433096-438421 bp 2 RT 2: 871173-874856 bp Neighborhood of RT #1 [433096, 438429] PRK09678 RVT-Retrons NucS COG3440 Neighborhood of RT #2 [871173, 874906] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 433096-433368 bp Ori: BBP11077.1 Feature: domain Description: PRK09678 Location: 433105-433261 bp Feature: domain Description: PRK09678 Location: 4331 05-433261 bp Feature: gene Location: 433996-434982 bp Feature: gene Location: 434984-435916 bp Ori: BBP11079.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 435086-435680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 435086-435680 bp Feature: gene Location: 436448-437446 bp Ori: BBP11080.1 Feature: domain Description: NucS Location: 436493-436850 bp Feature: domain Description: NucS Location: 436493-436850 bp Feature: gene Location: 437557-438429 bp Ori: BBP11081.1 Feature: domain Description: COG3440 Location: 437560-438421 bp Feature: domain Description: COG3440 Location: 437560-438421 bp Feature: gene Location: 871173-871499 bp Ori: BBP11463.1 Feature: domain Description: InsE Location: 871176-871497 bp Feature: domain Description: InsE Location: 871 1 76-871 497 bp Feature: gene Location: 871499-871978 bp Ori: BBP11464.1 Feature: domain Description: PHA02517 Location: 871559-871913 bp Feature: domain Description: PHA0251 7 Location: 871 559-871 91 3 bp Feature: gene Location: 872570-874093 bp Ori: BBP11465.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872843-873575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872843-873575 bp Feature: domain Description: GIIM Note: maturase Location: 873650-873848 bp Feature: domain Description: GIIM Note: maturase Location: 873650-873848 bp Feature: gene Location: 874288-874662 bp Ori: BBP11466.1 Feature: domain Description: PHA02517 Location: 874291-874651 bp Feature: domain Description: PHA0251 7 Location: 874291 -874651 bp Feature: gene Location: 874655-874906 bp Ori: BBP11467.1 Feature: domain Description: InsE Location: 874670-874856 bp Feature: domain Description: InsE Location: 874670-874856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, NucS (pfam01939), COG3440 (Predicted restriction endonuclease ), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)