myRT

myRT report for GCA_011404215.1_ASM1140421v1

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Seq: AP021891.1 Escherichia coli 2017.01.04CC DNA, complete genome (4615626 bp)
Overview 1 RT 1: 3983830-3989149 bp 2 RT 2: 3995431-4000220 bp Neighborhood of RT #1 [3983830, 3989149] PtsN LacI PBP1_GntR RVT-GII GIIM RVT-GII Neighborhood of RT #2 [3995431, 4000225] COG3440 PHA02517 RVT-GII GIIM PHA02517 Tra5 Feature: gene Location: 3983830-3984273 bp Ori: BBP18926.1 Feature: domain Description: PtsN Location: 3983833-3984268 bp Feature: domain Description: PtsN Location: 3983833-3984268 bp Feature: gene Location: 3984544-3985575 bp Ori: BBP18927.1 Feature: domain Description: LacI Location: 3984586-3984721 bp Feature: domain Description: LacI Location: 3984586-3984721 bp Feature: domain Description: PBP1_GntR Location: 3984760-3985570 bp Feature: domain Description: PBP1 _GntR Location: 3984760-3985570 bp Feature: gene Location: 3986102-3986953 bp Ori: BBP18928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3986105-3986513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39861 05-398651 3 bp Feature: domain Description: GIIM Note: maturase Location: 3986561-3986786 bp Feature: domain Description: GIIM Note: maturase Location: 3986561 -3986786 bp Feature: gene Location: 3986926-3987372 bp Ori: BBP18929.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987130-3987346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39871 30-3987346 bp Feature: gene Location: 3988269-3988595 bp Feature: gene Location: 3988805-3989149 bp Feature: gene Location: 3995431-3996267 bp Ori: BBP18936.1 Feature: domain Description: COG3440 Location: 3995443-3996256 bp Feature: domain Description: COG3440 Location: 3995443-3996256 bp Feature: gene Location: 3996301-3996675 bp Ori: BBP18937.1 Feature: domain Description: PHA02517 Location: 3996304-3996664 bp Feature: domain Description: PHA0251 7 Location: 3996304-3996664 bp Feature: gene Location: 3996870-3998378 bp Ori: BBP18938.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3997128-3997860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39971 28-3997860 bp Feature: domain Description: GIIM Note: maturase Location: 3997935-3998133 bp Feature: domain Description: GIIM Note: maturase Location: 3997935-39981 33 bp Feature: gene Location: 3998985-3999248 bp Ori: BBP18939.1 Feature: domain Description: PHA02517 Location: 3998991-3999183 bp Feature: domain Description: PHA0251 7 Location: 3998991 -39991 83 bp Feature: gene Location: 3999359-4000225 bp Ori: BBP18940.1 Gene: insF5_4 Feature: domain Description: Tra5 Location: 3999470-4000220 bp Feature: domain Description: Tra5 Location: 3999470-4000220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PtsN (COG1762), LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), COG3440 (Predicted restriction endonuclease ), PHA02517 (putative transposase OrfB; Reviewed), Tra5 (COG2801)