myRT

myRT report for GCA_011492925.1_ASM1149292v1

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Seq: CP049979.1 Escherichia coli strain IBS28 chromosome, complete genome (4934027 bp)
Overview 1 RT 1: 3747490-3752542 bp 2 RT 2: 4834712-4839399 bp Neighborhood of RT #1 [3747490, 3752542] COG3547 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [4834712, 4839399] AfaD-like RVT-GII GIIM PHA02517 Feature: gene Location: 3747490-3748518 bp Feature: domain Description: COG3547 Location: 3748195-3748456 bp Feature: domain Description: COG3547 Location: 37481 95-3748456 bp Feature: gene Location: 3748677-3749156 bp Feature: domain Description: PHA02517 Location: 3748680-3749154 bp Feature: domain Description: PHA0251 7 Location: 3748680-37491 54 bp Feature: gene Location: 3749240-3750748 bp Ori: QIN59971.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3749498-3750230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3749498-3750230 bp Feature: domain Description: GIIM Note: maturase Location: 3750305-3750503 bp Feature: domain Description: GIIM Note: maturase Location: 3750305-3750503 bp Feature: gene Location: 3751421-3752160 bp Feature: domain Description: InsE Location: 3751424-3751763 bp Feature: domain Description: InsE Location: 3751 424-3751 763 bp Feature: gene Location: 3752372-3752542 bp Feature: gene Location: 4834712-4835059 bp Ori: QIN59739.1 Feature: domain Description: AfaD-like Location: 4834730-4835057 bp Feature: domain Description: AfaD-like Location: 4834730-4835057 bp Feature: gene Location: 4835117-4835849 bp Feature: gene Location: 4836522-4838030 bp Ori: QIN60020.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4836780-4837512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4836780-483751 2 bp Feature: domain Description: GIIM Note: maturase Location: 4837587-4837785 bp Feature: domain Description: GIIM Note: maturase Location: 4837587-4837785 bp Feature: gene Location: 4838111-4838599 bp Feature: domain Description: PHA02517 Location: 4838114-4838564 bp Feature: domain Description: PHA0251 7 Location: 48381 1 4-4838564 bp Feature: gene Location: 4838776-4839399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), AfaD-like (cd18776)