myRT

myRT report for GCA_011604505.1_ASM1160450v1

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Seq: CP050089.1 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence (333383 bp)
Overview 1 RT 1: 173467-176357 bp Neighborhood of RT #1 [173467, 176357] BON Rve RVT-GII GIIM PhdYeFM_antitox Feature: gene Location: 173467-173784 bp Ori: QIO63216.1 Feature: domain Description: BON Location: 173500-173689 bp Feature: domain Description: BON Location: 1 73500-1 73689 bp Feature: gene Location: 174050-174443 bp Feature: domain Description: Rve Location: 174056-174242 bp Feature: domain Description: Rve Location: 1 74056-1 74242 bp Feature: gene Location: 174506-175047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174515-174650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7451 5-1 74650 bp Feature: domain Description: GIIM Note: maturase Location: 174731-174950 bp Feature: domain Description: GIIM Note: maturase Location: 1 74731 -1 74950 bp Feature: gene Location: 175072-175332 bp Ori: QIO63322.1 Feature: domain Description: PhdYeFM_antitox Location: 175075-175210 bp Feature: domain Description: PhdYeFM_antitox Location: 1 75075-1 7521 0 bp Feature: gene Location: 175415-176357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BON (smart00749), Rve (COG3316), RVT-GII, GIIM (pfam08388), PhdYeFM_antitox (pfam02604)

Seq: CP050085.1 Rhizobium leguminosarum bv. trifolii strain 23B chromosome, complete genome (4994037 bp)
Overview 1 RT 1: 4141331-4147799 bp 2 RT 2: 4152220-4156963 bp 3 RT 3: 4910833-4914443 bp Neighborhood of RT #1 [4141331, 4147808] SR_Res_par PRK14975 RVT-UG9 InsE Neighborhood of RT #2 [4152220, 4157013] RVT-CRISPR-like HTH_17 XerC Neighborhood of RT #3 [4910833, 4914523] RVT-AbiP2 S24_LexA-like HTH_35 Feature: gene Location: 4141331-4141954 bp Ori: QIO59974.1 Feature: domain Description: SR_Res_par Location: 4141340-4141772 bp Feature: domain Description: SR_Res_par Location: 4141340-4141772 bp Feature: gene Location: 4142092-4143684 bp Ori: QIO59975.1 Feature: domain Description: PRK14975 Location: 4142176-4143622 bp Feature: domain Description: PRK14975 Location: 4142 176-414362 2 bp Feature: gene Location: 4143677-4145338 bp Ori: QIO59976.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4143884-4144535 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4143884-4144535 bp Feature: gene Location: 4145542-4147458 bp Feature: gene Location: 4147550-4147808 bp Ori: QIO59977.1 Feature: domain Description: InsE Location: 4147553-4147799 bp Feature: domain Description: InsE Location: 4147553-4147799 bp Feature: gene Location: 4152220-4152891 bp Feature: gene Location: 4153066-4153512 bp Feature: gene Location: 4153721-4155136 bp Ori: QIO59982.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4154120-4154615 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 415412 0-4154615 bp Feature: gene Location: 4155395-4155829 bp Ori: QIO59983.1 Feature: domain Description: HTH_17 Location: 4155557-4155689 bp Feature: domain Description: HTH_17 Location: 4155557-4155689 bp Feature: gene Location: 4155826-4157013 bp Ori: QIO59984.1 Feature: domain Description: XerC Location: 4156060-4156963 bp Feature: domain Description: XerC Location: 4156060-4156963 bp Feature: gene Location: 4910833-4911333 bp Feature: gene Location: 4911457-4911693 bp Feature: gene Location: 4911860-4913356 bp Ori: QIO60659.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4912277-4912724 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4912 2 77-4912 72 4 bp Feature: gene Location: 4913369-4913815 bp Feature: domain Description: S24_LexA-like Location: 4913525-4913768 bp Feature: domain Description: S2 4_LexA-like Location: 491352 5-4913768 bp Feature: gene Location: 4914191-4914523 bp Ori: QIO60660.1 Feature: domain Description: HTH_35 Location: 4914260-4914443 bp Feature: domain Description: HTH_35 Location: 49142 60-4914443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_Res_par (cd03767), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, InsE (COG2963), RVT-CRISPR, HTH_17 (pfam12728), XerC (COG4973), RVT-AbiP2, S24_LexA-like (cd06529), HTH_35 (pfam13693)

Seq: CP050090.1 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence (214420 bp)
Overview 1 RT 1: 181961-184686 bp Neighborhood of RT #1 [181961, 184757] TnpB_IS66 InsE RVT-GII Rve CypX Feature: gene Location: 181961-182305 bp Ori: QIO63467.1 Gene: tnpB Feature: domain Description: TnpB_IS66 Location: 181982-182270 bp Feature: domain Description: TnpB_IS66 Location: 181982-182270 bp Feature: gene Location: 182302-182646 bp Ori: QIO63468.1 Feature: domain Description: InsE Location: 182344-182557 bp Feature: domain Description: InsE Location: 1823 44-182557 bp Feature: gene Location: 182927-183418 bp Ori: QIO63469.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182972-183308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182972-183 3 08 bp Feature: gene Location: 183469-183711 bp Feature: domain Description: Rve Location: 183496-183712 bp Feature: domain Description: Rve Location: 183 496-183 712 bp Feature: gene Location: 184500-184757 bp Ori: QIO63503.1 Feature: domain Description: CypX Location: 184563-184686 bp Feature: domain Description: CypX Location: 184563 -184686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), InsE (COG2963), RVT-GII, Rve (COG3316), CypX (COG2124)